RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TSNARE1Q96NA8 513 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 CYP4F12Q9HCS2 524 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 C9JVG2 144 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 TRIM38O00635 465 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 FBP2O00757 339 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 PORP16435 677 aaPredicted RBP16.91■□□□□ 0.3
PKP4-204ENST00000421462 UGT1A1P22309 533 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 UGT1A4P22310 534 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 UGT1A3P35503 534 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 UGT1A5P35504 534 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 ALDH3B2P48448 385 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 IFRD2Q12894 506 aaPredicted RBP16.91■□□□□ 0.3
PKP4-204ENST00000421462 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 CROCCP3Q8IVE0 287 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 DDHD1Q8NEL9 900 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 CXorf21Q9HAI6 301 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 ZBTB26Q9HCK0 441 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 RBMX2Q9Y388 322 aaKnown RBP16.91■□□□□ 0.3
PKP4-204ENST00000421462 RAP2CQ9Y3L5 183 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 QSER1Q2KHR3 1735 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 A0A0A0MRY4 1105 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CILPO75339 1184 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 ALDH1A2O94788 518 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 GNA12Q03113 381 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 TRAF2Q12933 501 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 TRIM25Q14258 630 aaKnown RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 CERCAMQ5T4B2 595 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 JADE1Q6IE81 842 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CBR4Q8N4T8 237 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 P2RY11Q96G91 374 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 COX4I2Q96KJ9 171 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 SPATA13Q96N96 652 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 RBBP8Q99708 897 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 TRIM8Q9BZR9 551 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 ATP6AP2A0A1C7CYW4 349 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 PRORSD1PA6NEY8 169 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 NEMP2A6NFY4 417 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 VWA5AO00534 786 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 MFSD11O43934 449 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 ATP6AP2O75787 350 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 MAGEA6P43360 314 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 PRPSAP1Q14558 356 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 USP10Q14694 798 aaKnown RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 INSCQ1MX18 579 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 KIZQ2M2Z5 673 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 MAP7D1Q3KQU3 841 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CARM1Q86X55 608 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 OR9I1Q8NGQ6 314 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CANT1Q8WVQ1 401 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 KCTD15Q96SI1 283 aaPredicted RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 CPNE1Q99829 537 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 RMI1Q9H9A7 625 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 POLR1BQ9H9Y6 1135 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 KLHL8Q9P2G9 620 aaPredicted RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 EGFL7Q9UHF1 273 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 V9GYQ6 96 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CNTNAP1P78357 1384 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 C9IYK1 514 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 NR4A1P22736 598 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 KPNA1P52294 538 aaPredicted RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 PLK1P53350 603 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 LAMTOR4Q0VGL1 99 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 PPP1R26Q5T8A7 1209 aaPredicted RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 SETD3Q86TU7 594 aaPredicted RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 GPR180Q86V85 440 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 ZBTB8OSQ8IWT0 167 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 LRRC43Q8N309 656 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 DCPSQ96C86 337 aaKnown RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 ZNF597Q96LX8 424 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 OXSMQ9NWU1 459 aa16.9■□□□□ 0.3
PKP4-204ENST00000421462 CNOT6Q9ULM6 557 aaKnown RBP16.9■□□□□ 0.3
PKP4-204ENST00000421462 FUOMA2VDF0 154 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 HCRTO43612 131 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 MT-ND1P03886 318 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 FUCA1P04066 466 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 ZNF182P17025 639 aaPredicted RBP16.89■□□□□ 0.29
PKP4-204ENST00000421462 TSPAN8P19075 237 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 HMOX2P30519 316 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 HALP42357 657 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 USP41Q3LFD5 358 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 GRTP1Q5TC63 336 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 ATF7IP2Q5U623 682 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 HMBOX1Q6NT76 420 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 FBXL20Q96IG2 436 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 HPDLQ96IR7 371 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 PLEKHA8Q96JA3 519 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 CHRAC1Q9NRG0 131 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
PKP4-204ENST00000421462 TLL2Q9Y6L7 1015 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 C1orf232A0A0U1RR37 186 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 CCDC130P13994 396 aa16.89■□□□□ 0.29
PKP4-204ENST00000421462 TXNL4AP83876 142 aaKnown RBP16.89■□□□□ 0.29
PKP4-204ENST00000421462 ITGADQ13349 1161 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms