RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 DNMT3BQ9UBC3 853 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 PSME2Q9UL46 239 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 COPG1Q9Y678 874 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 HEATR9A2RTY3 570 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF839A8K0R7 811 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 METTL18O95568 372 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 OPRL1P41146 370 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 GRIA1P42261 906 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 MAGEA12P43365 314 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 CCT8P50990 548 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 SCNN1DP51172 638 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 NSUN2Q08J23 767 aaKnown RBP eCLIP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 NFIAQ12857 509 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 STILQ15468 1287 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 KCNT2Q6UVM3 1135 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ILDR2Q71H61 639 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ITIH5Q86UX2 942 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 PCDH20Q8N6Y1 951 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 PNPT1Q8TCS8 783 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 RAB2BQ8WUD1 216 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 DCPSQ96C86 337 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 RNF157Q96PX1 679 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 PEBP4Q96S96 227 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 MTG1Q9BT17 334 aaPredicted RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 GATA5Q9BWX5 397 aaPredicted RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 MUC3BQ9H195 1237 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ANKEF1Q9NU02 776 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 TJP2Q9UDY2 1190 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 GGA1Q9UJY5 639 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ANKRD34BA5PLL1 514 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 PRORSD1PA6NEY8 169 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SEC14L2O76054 403 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 HOXD11P31277 338 aaPredicted RBP8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 ACOT2P49753 483 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 DMPKQ09013 629 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 DGKDQ16760 1214 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 TIGD2Q4W5G0 525 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 TAS1R3Q7RTX0 852 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SAPCD2Q86UD0 394 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 EPHX4Q8IUS5 362 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 PQLC3Q8N755 202 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 ABHD11Q8NFV4 315 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC7A14Q8TBB6 771 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 TFAP2BQ92481 460 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SEPT8Q92599 483 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 ISL2Q96A47 359 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SH3YL1Q96HL8 342 aaPredicted RBP8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SNX15Q9NRS6 342 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 SARDHQ9UL12 918 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 CDYLQ9Y232 598 aa8.15□□□□□ -1.11
HMGXB4-202ENST00000418170 WDR27A2RRH5 827 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 SAC3D1A6NKF1 404 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MYO1DO94832 1006 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 C7P10643 843 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 TGM1P22735 817 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ATP6V0D1P61421 351 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 C6orf10Q5SRN2 563 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CYP2R1Q6VVX0 501 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MMAAQ8IVH4 418 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CCDC60Q8IWA6 550 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MARK4Q96L34 752 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 HMG20AQ9NP66 347 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 HACD3Q9P035 362 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 VTI1BQ9UEU0 232 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ST14Q9Y5Y6 855 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 WDR81Q562E7 1941 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 E2F8A0AVK6 867 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 IL18RAPO95256 599 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 JUNBP17275 347 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 TFEBP19484 476 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 HLCSP50747 726 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MAPK10P53779 464 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MRPS9P82933 396 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 FSTL1Q12841 308 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 TUBA3CQ13748 450 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ZNF394Q53GI3 561 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 PERM1Q5SV97 790 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 TREML2Q5T2D2 321 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CYP4V2Q6ZWL3 525 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CMC1Q7Z7K0 106 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ANKRD13BQ86YJ7 626 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 ZC3H15Q8WU90 426 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 YTHDF1Q9BYJ9 559 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 RAD21L1Q9H4I0 556 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CD300AQ9UGN4 299 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 PTPRFP10586 1907 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 KCNU1A8MYU2 1149 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 SLCO1B7G3V0H7 640 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 POLRMTO00411 1230 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 PIK3R2O00459 728 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 CLOCKO15516 846 aa8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 MSI1O43347 362 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-202ENST00000418170 LTFP02788 710 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms