RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 BANPQ8N9N5 519 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 MGARPQ8TDB4 240 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 SMYD2Q9NRG4 433 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 STOML2Q9UJZ1 356 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 SOX13Q9UN79 622 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 IRAK3Q9Y616 596 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 FAM169AQ9Y6X4 670 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 PIAS1O75925 651 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 F11P03951 625 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 ADH1AP07327 375 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 DRD4P21917 467 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 CORO1AP31146 461 aaKnown RBP17.09■□□□□ 0.33
SSBP3-205ENST00000417664 CCT5P48643 541 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 CRADDP78560 199 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 ADGRF1Q5T601 910 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 POTEHQ6S545 545 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 TIFABQ6ZNK6 161 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 CHST9Q7L1S5 443 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 TAX1BP1Q86VP1 789 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSBP3-205ENST00000417664 SP7Q8TDD2 431 aaPredicted RBP17.09■□□□□ 0.33
SSBP3-205ENST00000417664 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 RAD9AQ99638 391 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 KIF9Q9HAQ2 790 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 KIAA1671Q9BY89 1806 aa17.09■□□□□ 0.33
SSBP3-205ENST00000417664 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 USP12O75317 370 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 SPAG7O75391 227 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
SSBP3-205ENST00000417664 ADRA1AP35348 466 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 PPARDQ03181 441 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 LRRC14Q15048 493 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 SEPT7Q16181 437 aaKnown RBP17.08■□□□□ 0.32
SSBP3-205ENST00000417664 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 GKAP1Q5VSY0 366 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-205ENST00000417664 SH2D5Q6ZV89 423 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 MICALCLQ6ZW33 695 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 RTL10Q7L3V2 364 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-205ENST00000417664 DENND1CQ8IV53 801 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 BADQ92934 168 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 IMP4Q96G21 291 aaKnown RBP17.08■□□□□ 0.32
SSBP3-205ENST00000417664 CERS2Q96G23 380 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF419Q96HQ0 510 aaPredicted RBP17.08■□□□□ 0.32
SSBP3-205ENST00000417664 KIFC1Q9BW19 673 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 MKS1Q9NXB0 559 aa17.08■□□□□ 0.32
SSBP3-205ENST00000417664 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TRIM49D1C9J1S8 452 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 J3KR12 359 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 PRAMEF11O60813 436 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 OLFM2O95897 454 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 PFKLP17858 780 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 SLC6A4P31645 630 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 RPA3P35244 121 aaPredicted RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ETFBP38117 255 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 HNRNPH2P55795 449 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 WDR4P57081 412 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 PCID2Q5JVF3 399 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TMCO4Q5TGY1 634 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 RANBP10Q6VN20 620 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 RGS9BPQ6ZS82 235 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TMEM150AQ86TG1 271 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ZNF354CQ86Y25 554 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 BBS5Q8N3I7 341 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 KLHL23Q8NBE8 558 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 SPATA22Q8NHS9 363 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 APOPT1Q96IL0 206 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 CPNE1Q99829 537 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 FSD1LQ9BXM9 530 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 EMILIN2Q9BXX0 1053 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 RABEP2Q9H5N1 569 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ARNT2Q9HBZ2 717 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 MRM3Q9HC36 420 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 UBP1Q9NZI7 540 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ZFATQ9P243 1243 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 RWDD3Q9Y3V2 267 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 A0A1B0GVM2 712 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ILVBLA1L0T0 632 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 C2orf78A6NCI8 922 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TCAF2A6NFQ2 919 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TGM5O43548 720 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 CXCL14O95715 111 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 MT-CYBP00156 380 aaPredicted RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 LRG1P02750 347 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 KLKB1P03952 638 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 VIMP08670 466 aaKnown RBP17.07■□□□□ 0.32
SSBP3-205ENST00000417664 CERCAMQ5T4B2 595 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 HHATQ5VTY9 493 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 TMC7Q7Z402 723 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ELMOD1Q8N336 334 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
SSBP3-205ENST00000417664 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms