RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SGK1O00141 431 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 NPC1O15118 1278 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SYNCRIPO60506 623 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RNF40O75150 1001 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 IGSF6O95976 241 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 DLDP09622 509 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 GLDCP23378 1020 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CCNCP24863 283 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RENBPP51606 427 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 PLK1P53350 603 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LMNB2Q03252 620 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RAD51Q06609 339 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SLC20A2Q08357 652 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 XRCC4Q13426 336 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 TUBB2AQ13885 445 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 BYSLQ13895 437 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LBRQ14739 615 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 STARD3Q14849 445 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 NOMO1Q15155 1222 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 GAB4Q2WGN9 574 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SLC45A4Q5BKX6 768 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 TMCO4Q5TGY1 634 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 MARC1Q5VT66 337 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 FSTL4Q6MZW2 842 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LINGO4Q6UY18 593 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ARHGAP12Q8IWW6 846 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC105Q8IYK2 499 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RASGEF1CQ8N431 466 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC89Q8N998 374 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 MNS1Q8NEH6 495 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 OR52K2Q8NGK3 314 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 GRK7Q8WTQ7 553 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CASKIN2Q8WXE0 1202 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SORCS1Q8WY21 1168 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 EDAQ92838 391 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 MAGOHBQ96A72 148 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RPL10LQ96L21 214 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 QKIQ96PU8 341 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 TUBB2BQ9BVA1 445 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 AP1M1Q9BXS5 423 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LTB4R2Q9NPC1 389 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CD320Q9NPF0 282 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 KLHL8Q9P2G9 620 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF212Q9UDV6 495 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SEPT3Q9UH03 358 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 TCRBV7S2A1N4TA0A589 114 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 KRBA1A5PL33 1030 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 PRRT4C9JH25 899 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 J3KR12 359 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 KCNN4O15554 427 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF500O60304 480 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 PRAMEF11O60813 436 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ATG13O75143 517 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 KLF8O95600 359 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 IFNB1P01574 187 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 EPHX1P07099 455 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 HOXB2P14652 356 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 WASP42768 502 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CTSOP43234 321 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 MMP13P45452 471 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 STK19P49842 368 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SERPINH1P50454 418 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 NUBP1P53384 320 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 STARD6P59095 220 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SNRPD1P62314 119 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 MRPS21P82921 87 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ADCY2Q08462 1091 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 PPIDQ08752 370 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF234Q14588 700 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 WHAMMP3Q1A5X7 153 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 EOGTQ5NDL2 527 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CFAP58Q5T655 872 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 AFMIDQ63HM1 303 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 EGFLAMQ63HQ2 1017 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ARHGAP36Q6ZRI8 547 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 B4GALNT4Q76KP1 1039 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ADIPOR2Q86V24 386 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RPLP0P6Q8NHW5 317 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 HTR3CQ8WXA8 447 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ATG4AQ8WYN0 398 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 TTC17Q96AE7 1141 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 P2RY11Q96G91 374 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RUNDC3BQ96NL0 473 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF599Q96NL3 588 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LGMNQ99538 433 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 ACE2Q9BYF1 805 aaPredicted RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 FOXQ1Q9C009 403 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 NOL6Q9H6R4 1146 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 LMAN1LQ9HAT1 526 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 NT5MQ9NPB1 228 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 RBM12Q9NTZ6 932 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SMARCAL1Q9NZC9 954 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 SUN2Q9UH99 717 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 CDC23Q9UJX2 597 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 INTS6Q9UL03 887 aaKnown RBP8.63□□□□□ -1.03
TRIM48-201ENST00000417545 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms