RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DPYSL3Q14195 570 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 ELAVL3Q14576 367 aaKnown RBP23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 GSE1Q14687 1217 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 ZNF776Q68DI1 518 aaPredicted RBP23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 DSG4Q86SJ6 1040 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 CASKIN2Q8WXE0 1202 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 TSGA10Q9BZW7 698 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 MTG2Q9H4K7 406 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 SALL4Q9UJQ4 1053 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 ADGRG1Q9Y653 693 aa23.58■■□□□ 1.37
SMARCB1-205ENST00000417137 PROB1E7EW31 1015 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 DCLK1O15075 740 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 PSTPIP1O43586 416 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 TNNT1P13805 278 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 IL4RP24394 825 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 RECQLP46063 649 aaPredicted RBP23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 VSIG1Q86XK7 387 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 KIAA1524Q8TCG1 905 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 NKD2Q969F2 451 aaPredicted RBP23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 CELF6Q96J87 481 aaKnown RBP23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 SLC39A8Q9C0K1 460 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 RSPH9Q9H1X1 276 aaPredicted RBP23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 EPC1Q9H2F5 836 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 SCML1Q9UN30 329 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 HYOU1Q9Y4L1 999 aa23.57■■□□□ 1.36
SMARCB1-205ENST00000417137 LRRD1A4D1F6 860 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 ZNF487B1APH4 448 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 K7ERQ8 282 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 MAP3K13O43283 966 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 DNTTP04053 509 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 CD48P09326 243 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 P2RY2P41231 377 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 PAPOLAP51003 745 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 MMRN1Q13201 1228 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 ANKRD20A8PQ5CZ79 823 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 AFMIDQ63HM1 303 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 PCDH20Q8N6Y1 951 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 OR8D1Q8WZ84 308 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 RAPGEF5Q92565 580 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 ISG20Q96AZ6 181 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 MAK16Q9BXY0 300 aaKnown RBP23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 KLC2Q9H0B6 622 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 SLC6A17Q9H1V8 727 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 ITM2CQ9NQX7 267 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 KLHL11Q9NVR0 708 aa23.56■■□□□ 1.36
SMARCB1-205ENST00000417137 DFFAO00273 331 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 ALOX15BO15296 676 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 SMAD6O43541 496 aaKnown RBP23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 KRT86O43790 486 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 GFRA3O60609 400 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 C7P10643 843 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 OXTRP30559 389 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 RPS14P62263 151 aaKnown RBP23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 SRSF5Q13243 272 aaKnown RBP23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 INO80DQ53TQ3 878 aaPredicted RBP23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 C22orf39Q6P5X5 142 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 SLC36A4Q6YBV0 504 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 PRR23BQ6ZRT6 265 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 Q6ZVU0 165 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 SYCE1Q8N0S2 351 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 STK40Q8N2I9 435 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 RNF10Q8N5U6 811 aaKnown RBP23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 RLN3Q8WXF3 142 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 FAM129BQ96TA1 746 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 INVSQ9Y283 1065 aa23.55■■□□□ 1.36
SMARCB1-205ENST00000417137 CACNA1HO95180 2353 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 MACROD2A1Z1Q3 448 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 MCF2LO15068 1137 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 BNIP3LO60238 219 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 RHOBTB1O94844 696 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 LMNAP02545 664 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 KRT1P04264 644 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 PTMAP06454 111 aaKnown RBP23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 CCDC175P0C221 793 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 VAV1P15498 845 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 DNA2P51530 1060 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 MAP7D1Q3KQU3 841 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 TTC31Q49AM3 519 aaPredicted RBP23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 FAM46CQ5VWP2 391 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 LRRC49Q8IUZ0 686 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 ARHGAP12Q8IWW6 846 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 PLPP6Q8IY26 295 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 NPWQ8N729 165 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 PCDH19Q8TAB3 1148 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 FAF2Q96CS3 445 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 ETNK2Q9NVF9 386 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 NCKAP1Q9Y2A7 1128 aa23.54■■□□□ 1.36
SMARCB1-205ENST00000417137 PRAMEF11O60813 436 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 CD160O95971 181 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 ADH1BP00325 375 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 CCZ1BP86790 482 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 CCZ1P86791 482 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 ELF2Q15723 593 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 CARD16Q5EG05 197 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 MMAAQ8IVH4 418 aaKnown RBP23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 RNF157Q96PX1 679 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 GOLPH3Q9H4A6 298 aa23.53■■□□□ 1.36
SMARCB1-205ENST00000417137 SP110Q9HB58 689 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms