RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 HLA-FP30511 346 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 CD70P32970 193 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 GJA4P35212 333 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 FDFT1P37268 417 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 HSPA9P38646 679 aaKnown RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 NNMTP40261 264 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 TNNT3P45378 269 aaPredicted RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 MMP13P45452 471 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 PLK1P53350 603 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 GDF10P55107 478 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 IFI35P80217 286 aaPredicted RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 BASP1P80723 227 aaKnown RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 MRPS25P82663 173 aaKnown RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 PFKPQ01813 784 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 GUCY2DQ02846 1103 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 KDSRQ06136 332 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 TNK2Q07912 1038 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 GPS1Q13098 491 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 HNRNPDQ14103 355 aaKnown RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 HLTFQ14527 1009 aaKnown RBP eCLIP8.57□□□□□ -1.04
RBM39-208ENST00000416108 RFTN1Q14699 578 aaPredicted RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 LBRQ14739 615 aaKnown RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 E2F5Q15329 346 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ERCC6LQ2NKX8 1250 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 FSCBQ5H9T9 825 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 PITRM1Q5JRX3 1037 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ANKRD20A2Q5SQ80 823 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ARTNQ5T4W7 220 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ANKRD20A1Q5TYW2 823 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ANKRD20A3Q5VUR7 823 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 TTC8Q8TAM2 541 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 CCDC110Q8TBZ0 833 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 WFDC5Q8TCV5 224 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 UCMAQ8WVF2 138 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 CASKIN2Q8WXE0 1202 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 DNASE1L2Q92874 299 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 FATE1Q969F0 183 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ASIC4Q96FT7 647 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 SNF8Q96H20 258 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 AGAP3Q96P47 875 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ERP44Q9BS26 406 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 FEM1AQ9BSK4 669 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 ACE2Q9BYF1 805 aaPredicted RBP8.57□□□□□ -1.04
RBM39-208ENST00000416108 CEP41Q9BYV8 373 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 EPB41L5Q9HCM4 733 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 RBM22Q9NW64 420 aaKnown RBP eCLIP8.57□□□□□ -1.042e-13■■■■■ 49.1
RBM39-208ENST00000416108 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 SEPT3Q9UH03 358 aa8.57□□□□□ -1.04
RBM39-208ENST00000416108 UQCRHLA0A096LP55 91 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 J3KR12 359 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 DNALI1O14645 258 aaPredicted RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 PSMD3O43242 534 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 SNAP91O60641 907 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 TULP3O75386 442 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 GCATO75600 419 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 JCHAINP01591 159 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 ASLP04424 464 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 APODP05090 189 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 UQCRHP07919 91 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 ZSCAN5DPP0CG00 497 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 ETS1P14921 441 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 RPL22P35268 128 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 EIF2DP41214 584 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 NUMBP49757 651 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 TERF1P54274 439 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 ST8SIA6P61647 398 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 ARF5P84085 180 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 SLC20A2Q08357 652 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 ELF2Q15723 593 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 FUT11Q495W5 492 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 TEX44Q53QW1 395 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 IZUMO3Q5VZ72 239 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 MBLAC2Q68D91 279 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 LEKR1Q6ZMV7 388 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 PRUNE1Q86TP1 453 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 SUGP1Q8IWZ8 645 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 APCDD1Q8J025 514 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 ZNF567Q8N184 647 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 TAB3Q8N5C8 712 aaPredicted RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.56□□□□□ -1.04
RBM39-208ENST00000416108 ATP11CQ8NB49 1132 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 OR52K2Q8NGK3 314 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 MAML1Q92585 1016 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 RTP4Q96DX8 246 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 TEKT5Q96M29 485 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 PNKPQ96T60 521 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 IL12RB2Q99665 862 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 RPP25Q9BUL9 199 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 CIPCQ9C0C6 399 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 POLR1EQ9GZS1 481 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 KCNK12Q9HB15 430 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 PDFQ9HBH1 243 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 USP29Q9HBJ7 922 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 NT5MQ9NPB1 228 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 RAB6BQ9NRW1 208 aa8.56□□□□□ -1.04
RBM39-208ENST00000416108 MTRF1LQ9UGC7 380 aaKnown RBP8.56□□□□□ -1.04
RBM39-208ENST00000416108 VPS51Q9UID3 782 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms