RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 ZFYVE27Q5T4F4 411 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 IL31Q6EBC2 164 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 BBS12Q6ZW61 710 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 BZW1Q7L1Q6 419 aaKnown RBP12.17□□□□□ -0.46
ATG4B-207ENST00000415107 MAML2Q8IZL2 1156 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-207ENST00000415107 PCDH20Q8N6Y1 951 aaKnown RBP12.17□□□□□ -0.46
ATG4B-207ENST00000415107 CYB5D2Q8WUJ1 264 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 SORCS1Q8WY21 1168 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 TSGA13Q96PP4 275 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 BRD8Q9H0E9 1235 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 POLMQ9NP87 494 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-207ENST00000415107 CACNA2D2Q9NY47 1150 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 PYCARDQ9ULZ3 195 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 SLC8A2Q9UPR5 921 aa12.17□□□□□ -0.46
ATG4B-207ENST00000415107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATG4B-207ENST00000415107 ANTXRLA6NF34 631 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 APOC4-APOC2K7ER74 178 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 CBX4O00257 560 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 APOL1O14791 398 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 SNAP91O60641 907 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 ZNF189O75820 626 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 FTCDO95954 541 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 APOC2P02655 101 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 PRKCHP24723 683 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 CETN2P41208 172 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 GARSP41250 739 aaKnown RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 CTSOP43234 321 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 PAPOLAP51003 745 aaKnown RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 SATB1Q01826 763 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 ELAVL3Q14576 367 aaKnown RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 DCAF12L1Q5VU92 463 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 PTPRN2Q92932 1015 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 MAK16Q9BXY0 300 aaKnown RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
ATG4B-207ENST00000415107 DTLQ9NZJ0 730 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 AMACRQ9UHK6 382 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 MFHAS1Q9Y4C4 1052 aa12.16□□□□□ -0.46
ATG4B-207ENST00000415107 KIF5CO60282 957 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 MAFKO60675 156 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 ZNF821O75541 412 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 ALDH1A2O94788 518 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 APBB3O95704 486 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 PEX11BO96011 259 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 GSRP00390 522 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 MT-CO1P00395 513 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 PYGMP11217 842 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 GLDCP23378 1020 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 CCNCP24863 283 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 COPAP53621 1224 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 GBE1Q04446 702 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 ZBTB16Q05516 673 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 PPIDQ08752 370 aaKnown RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 KLF1Q13351 362 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 RPS6KA1Q15418 735 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 TIGD7Q6NT04 549 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 C22orf39Q6P5X5 142 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 ATPAF2Q8N5M1 289 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 TSTD1Q8NFU3 115 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 OR2T3Q8NH03 318 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 MAML1Q92585 1016 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 CELF6Q96J87 481 aaKnown RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 RPL10LQ96L21 214 aaKnown RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 SPON2Q9BUD6 331 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 TLR10Q9BXR5 811 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 OSBPL8Q9BZF1 889 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 C2orf42Q9NWW7 574 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 IPO11Q9UI26 975 aaKnown RBP12.15□□□□□ -0.46
ATG4B-207ENST00000415107 SLCO3A1Q9UIG8 710 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 SCML1Q9UN30 329 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 PLXND1Q9Y4D7 1925 aa12.15□□□□□ -0.46
ATG4B-207ENST00000415107 NUP205Q92621 2012 aa12.15□□□□□ -0.47
ATG4B-207ENST00000415107 CACNA1IQ9P0X4 2223 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 TTC34A8MYJ7 566 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 WASH3PC4AMC7 463 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 CES2O00748 559 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 PPP1R12AO14974 1030 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-207ENST00000415107 MCF2LO15068 1137 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 SYNCRIPO60506 623 aaKnown RBP12.14□□□□□ -0.47
ATG4B-207ENST00000415107 CST8O60676 142 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 TJP3O95049 919 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 IGLV3-19P01714 112 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 EPHX1P07099 455 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 TNNT1P13805 278 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 COL9A1P20849 921 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
ATG4B-207ENST00000415107 CSNK1DP48730 415 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 NRLP54845 237 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 SLC10A2Q12908 348 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-207ENST00000415107 XRCC4Q13426 336 aa12.14□□□□□ -0.47
ATG4B-207ENST00000415107 HNRNPDQ14103 355 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms