RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 UTP11Q9Y3A2 253 aaKnown RBP14.54□□□□□ -0.08
SF3B1-204ENST00000414963 NUP205Q92621 2012 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.53□□□□□ -0.08
SF3B1-204ENST00000414963 CBX4O00257 560 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 TIMM44O43615 452 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 CD160O95971 181 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 IFNB1P01574 187 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 JCHAINP01591 159 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ZSCAN5DPP0CG00 497 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ETS1P14921 441 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 IL9P15248 144 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 OPRD1P41143 372 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 DGKGP49619 791 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 GEMIN4P57678 1058 aaKnown RBP14.53□□□□□ -0.08
SF3B1-204ENST00000414963 MRPS25P82663 173 aaKnown RBP14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ARF5P84085 180 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ZBTB17Q13105 803 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 FUT11Q495W5 492 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 PREPLQ4J6C6 727 aaPredicted RBP14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ANKRD20A2Q5SQ80 823 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ANKRD20A1Q5TYW2 823 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 MARC1Q5VT66 337 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ANKRD20A3Q5VUR7 823 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 RETSATQ6NUM9 610 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
SF3B1-204ENST00000414963 C12orf40Q86WS4 652 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ADHFE1Q8IWW8 467 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 AHI1Q8N157 1196 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ZNF567Q8N184 647 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 PHTF2Q8N3S3 785 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 GPR161Q8N6U8 529 aaKnown RBP14.53□□□□□ -0.08
SF3B1-204ENST00000414963 CNTD1Q8N815 330 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 NAT16Q8N8M0 369 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 NSMCE1Q8WV22 266 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 CHFRQ96EP1 664 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 ANKZF1Q9H8Y5 726 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 VPS51Q9UID3 782 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 XIRP2A4UGR9 3374 aa14.53□□□□□ -0.08
SF3B1-204ENST00000414963 SNAP91O60641 907 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 HEXIM1O94992 359 aaKnown RBP14.52□□□□□ -0.09
SF3B1-204ENST00000414963 RHOXF2BP0C7M4 288 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 GLULP15104 373 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 GLDCP23378 1020 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 ACTN2P35609 894 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 SLC6A11P48066 632 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 NRLP54845 237 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 SLC7A5Q01650 507 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 SLC10A7Q0GE19 358 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 LBRQ14739 615 aaKnown RBP14.52□□□□□ -0.09
SF3B1-204ENST00000414963 ERCC6LQ2NKX8 1250 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 PARP6Q2NL67 630 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 GRAMD4Q6IC98 578 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 PRUNE1Q86TP1 453 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 ZNF354CQ86Y25 554 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 SUGP1Q8IWZ8 645 aaKnown RBP14.52□□□□□ -0.09
SF3B1-204ENST00000414963 KLHDC8BQ8IXV7 354 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 CCDC110Q8TBZ0 833 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 CSGALNACT1Q8TDX6 532 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 LRRC45Q96CN5 670 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 ZNF419Q96HQ0 510 aaPredicted RBP14.52□□□□□ -0.09
SF3B1-204ENST00000414963 PSKH2Q96QS6 385 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 RHOXF2Q9BQY4 288 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 TRIM51Q9BSJ1 452 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 GDF3Q9NR23 364 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 SLC2A4RGQ9NR83 387 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 RBM22Q9NW64 420 aaKnown RBP eCLIP14.52□□□□□ -0.099e-21■■■■□ 19.5
SF3B1-204ENST00000414963 SEPT10Q9P0V9 454 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 THEGQ9P2T0 379 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 UBA2Q9UBT2 640 aaPredicted RBP14.52□□□□□ -0.09
SF3B1-204ENST00000414963 HS3ST2Q9Y278 367 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 ATP8A1Q9Y2Q0 1164 aa14.52□□□□□ -0.09
SF3B1-204ENST00000414963 TRIM24O15164 1050 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ZBTB24O43167 697 aaPredicted RBP14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ASLP04424 464 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 TUBBP07437 444 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 POLR2EP19388 210 aaKnown RBP14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ITIH2P19823 946 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 CD68P34810 354 aaPredicted RBP14.51□□□□□ -0.09
SF3B1-204ENST00000414963 HSPA9P38646 679 aaKnown RBP14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ADCY8P40145 1251 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 MAGEA6P43360 314 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 MMP13P45452 471 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 TERF1P54274 439 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ECT2LQ008S8 904 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 PFKPQ01813 784 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 GPS1Q13098 491 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 TDGQ13569 410 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 EIF4HQ15056 248 aaKnown RBP14.51□□□□□ -0.09
SF3B1-204ENST00000414963 CYTH1Q15438 398 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 TRIP13Q15645 432 aaPredicted RBP14.51□□□□□ -0.09
SF3B1-204ENST00000414963 GEN1Q17RS7 908 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 TMEM215Q68D42 235 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 MBLAC2Q68D91 279 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ALG1LQ6GMV1 187 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ITPRIPL1Q6GPH6 555 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 ARHGEF18Q6ZSZ5 1173 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 PID1Q7Z2X4 250 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 IFT20Q8IY31 132 aa14.51□□□□□ -0.09
SF3B1-204ENST00000414963 EIF1ADQ8N9N8 165 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms