RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 XRCC4Q13426 336 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 DMC1Q14565 340 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 CCNG2Q16589 344 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 TMEM196Q5HYL7 178 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 EGFLAMQ63HQ2 1017 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 PRUNE1Q86TP1 453 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 SIX5Q8N196 739 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF366Q8N895 744 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 C12orf50Q8NA57 414 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 FAM3CQ92520 227 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 ERLEC1Q96DZ1 483 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 ELOVL2Q9NXB9 296 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 UBA2Q9UBT2 640 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 SLC25A13Q9UJS0 675 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 HCN2Q9UL51 889 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 ERVW-1Q9UQF0 538 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 HACD1B0YJ81 288 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 F5H423 210 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 K7EQS6 105 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 KCNN4O15554 427 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 SMAD6O43541 496 aaKnown RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 TMCC1O94876 653 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 GLULP15104 373 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 CCNCP24863 283 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 ECT2LQ008S8 904 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 CYP1B1Q16678 543 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 PTPRNQ16849 979 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 HEATR6Q6AI08 1181 aaKnown RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 UBALD2Q8IYN6 164 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 SPATA4Q8NEY3 305 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 NKD2Q969F2 451 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-204ENST00000414802 MRGPRX3Q96LB0 322 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 TSGA13Q96PP4 275 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 CARD6Q9BX69 1037 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 FOXQ1Q9C009 403 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 SLCO3A1Q9UIG8 710 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF148Q9UQR1 794 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 TTLL3Q9Y4R7 772 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 MUC3AQ02505 3323 aa13.37□□□□□ -0.27
CNOT4-204ENST00000414802 RNF103O00237 685 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 JCHAINP01591 159 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 DLDP09622 509 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 SRCP12931 536 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 TIE1P35590 1138 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 SERPINH1P50454 418 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 MRPS25P82663 173 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 ZXDAP98168 799 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 SULT2A1Q06520 285 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 SLC10A7Q0GE19 358 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 EIF4HQ15056 248 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 FNDC3BQ53EP0 1204 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 TMCO4Q5TGY1 634 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 TIGD7Q6NT04 549 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 CCDC137Q6PK04 289 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF572Q7Z3I7 529 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 SUGP1Q8IWZ8 645 aaKnown RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 ATP11CQ8NB49 1132 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 GLIS1Q8NBF1 620 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 LRRN4CLQ8ND94 238 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 HTR3CQ8WXA8 447 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 ACDQ96AP0 544 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 MSANTD3Q96H12 275 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 EXOC2Q96KP1 924 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 ACOX2Q99424 681 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 KRT12Q99456 494 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 FRMD8P1Q9BZ68 369 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-204ENST00000414802 MTG2Q9H4K7 406 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 NT5MQ9NPB1 228 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 WNT16Q9UBV4 365 aa13.36□□□□□ -0.27
CNOT4-204ENST00000414802 BCLAF3A2AJT9 711 aaKnown RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ZSCAN5CA6NGD5 496 aaPredicted RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TTC34A8MYJ7 566 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 SGK1O00141 431 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 MATN3O15232 486 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 IFNB1P01574 187 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ASLP04424 464 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 HLA-DQB2P05538 268 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 HLA-EP13747 358 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 CCNB1P14635 433 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ETS1P14921 441 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 PTPN3P26045 913 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TARSP26639 723 aaKnown RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 WASP42768 502 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 PRKCQQ04759 706 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TUBB2AQ13885 445 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF234Q14588 700 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF235Q14590 738 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 LBRQ14739 615 aaKnown RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 UBXN2BQ14CS0 331 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 CYTH1Q15438 398 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms