RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 DMPKQ09013 629 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 WASHC5Q12768 1159 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 TAC4Q86UU9 113 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 SLC26A11Q86WA9 606 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 NUP93Q8N1F7 819 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 BANPQ8N9N5 519 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 NETO2Q8NC67 525 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 PPP1R14CQ8TAE6 165 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 RAET1EQ8TD07 263 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 TRPC4APQ8TEL6 797 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 VPS50Q96JG6 964 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 WDCPQ9H6R7 721 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.28
LITAF-203ENST00000413364 ZNF212Q9UDV6 495 aa13.27□□□□□ -0.28
LITAF-203ENST00000413364 BOLA2-SMG1P6H3BVE0 249 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 B4GALT3O60512 393 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
LITAF-203ENST00000413364 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 PDK4Q16654 411 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 NOMO2Q5JPE7 1267 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 CLLU1OSQ5K130 101 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 LRRC6Q86X45 466 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 ANKRD13BQ86YJ7 626 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 SPATA2LQ8IUW3 424 aaPredicted RBP13.27□□□□□ -0.29
LITAF-203ENST00000413364 PXYLP1Q8TE99 480 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 LINC01599Q8WXQ3 324 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 SRPK1Q96SB4 655 aaKnown RBP13.27□□□□□ -0.29
LITAF-203ENST00000413364 PARVBQ9HBI1 364 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 MAD1L1Q9Y6D9 718 aa13.27□□□□□ -0.29
LITAF-203ENST00000413364 TM9SF1O15321 606 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 NCAM2O15394 837 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
LITAF-203ENST00000413364 GRIA1P42261 906 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 TMED10P49755 219 aaKnown RBP13.26□□□□□ -0.29
LITAF-203ENST00000413364 GALK1P51570 392 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 TUBA4AP68366 448 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 YWHAHQ04917 246 aaPredicted RBP13.26□□□□□ -0.29
LITAF-203ENST00000413364 SF3A3Q12874 501 aaKnown RBP eCLIP13.26□□□□□ -0.29
LITAF-203ENST00000413364 MTFR1Q15390 333 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 C4orf50Q6ZRC1 276 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 ZNF280BQ86YH2 543 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 TP53INP2Q8IXH6 220 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 ZNF567Q8N184 647 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 MPP5Q8N3R9 675 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 URGCPQ8TCY9 931 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 GAB3Q8WWW8 586 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 TKTL2Q9H0I9 626 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 SEPT10Q9P0V9 454 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 IGSF9Q9P2J2 1179 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 GRID1Q9ULK0 1009 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 TIMM22Q9Y584 194 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 PCNTO95613 3336 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 FRMPD3Q5JV73 1810 aa13.26□□□□□ -0.29
LITAF-203ENST00000413364 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 CXorf49A8MYA2 514 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 E9PBE3 544 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 TMEM189-UBE2V1I3L0A0 370 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 TRAFD1O14545 582 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 DDHD2O94830 711 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 IGLV3-25P01717 112 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 ZCCHC18P0CG32 403 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 CDK4P11802 303 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 MYCLP1P12525 358 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 EMP3P54852 163 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 TBL3Q12788 808 aaKnown RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 HSP90AA5PQ58FG0 334 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 SPDYAQ5MJ70 313 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 DEPDC1Q5TB30 811 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 TTC39BQ5VTQ0 682 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 LHX8Q68G74 356 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 CGB2Q6NT52 195 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 LRRC8BQ6P9F7 803 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 LVRNQ6Q4G3 990 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 PATL1Q86TB9 770 aaKnown RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 WDR75Q8IWA0 830 aaKnown RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 CTAGE3PQ8IX95 158 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 BBS5Q8N3I7 341 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 SCAMP5Q8TAC9 235 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 OR12D3Q9UGF7 316 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 HBS1LQ9Y450 684 aaKnown RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 FAM159BA6NKW6 160 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 FAM155BO75949 473 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 HSPA8P11142 646 aaKnown RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 PSMB4P28070 264 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 SLC18A2Q05940 514 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
LITAF-203ENST00000413364 DEFB115Q30KQ5 88 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 STEAP4Q687X5 459 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 Q6ZNX1 250 aa13.25□□□□□ -0.29
LITAF-203ENST00000413364 SH2D5Q6ZV89 423 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms