RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SLC10A7Q0GE19 358 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 ADAM15Q13444 863 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 HNRNPDQ14103 355 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 GRIN2CQ14957 1233 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 CTC1Q2NKJ3 1217 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 MPPE1Q53F39 396 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 FSCBQ5H9T9 825 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 FAM78AQ5JUQ0 283 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 FNBP1LQ5T0N5 605 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 UBAP2Q5T6F2 1119 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 TMCO4Q5TGY1 634 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 FYB2Q5VWT5 728 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 RNF219Q5W0B1 726 aaPredicted RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 IL31Q6EBC2 164 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 PPP1R21Q6ZMI0 780 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 TPGS1Q6ZTW0 290 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 CENPUQ71F23 418 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 TRMT10CQ7L0Y3 403 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 PID1Q7Z2X4 250 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 KLHDC8BQ8IXV7 354 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 TEX26Q8N6G2 289 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 CELF5Q8N6W0 485 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 DCAF4L2Q8NA75 395 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 MCUQ8NE86 351 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 DDI1Q8WTU0 396 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 UBLCP1Q8WVY7 318 aaPredicted RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 FGF13Q92913 245 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 SMARCD2Q92925 531 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 BHMTQ93088 406 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 OTUB2Q96DC9 234 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 RSPRY1Q96DX4 576 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 TMA16Q96EY4 203 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 ZNF599Q96NL3 588 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 ASB16Q96NS5 453 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 SERPINB12Q96P63 405 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS41-204ENST00000413141 WDR83Q9BRX9 315 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 MLPHQ9BV36 600 aaPredicted RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 ACE2Q9BYF1 805 aaPredicted RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 FRMD8Q9BZ67 464 aaPredicted RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 MUC3BQ9H195 1237 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 PABPC3Q9H361 631 aaKnown RBP6.78□□□□□ -1.32
VPS41-204ENST00000413141 ATP13A1Q9HD20 1204 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 SAYSD1Q9NPB0 183 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 RBM22Q9NW64 420 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS41-204ENST00000413141 GDE1Q9NZC3 331 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 TBC1D14Q9P2M4 693 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 TTLL3Q9Y4R7 772 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 OR51B4Q9Y5P0 310 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 MTCH2Q9Y6C9 303 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 WNT6Q9Y6F9 365 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 PDE4DIPQ5VU43 2346 aa6.78□□□□□ -1.32
VPS41-204ENST00000413141 GOLGA6BA6NDN3 693 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ERI2A8K979 691 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 NEDD8-MDP1E9PL57 170 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CBX4O00257 560 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 SLC9A3R1O14745 358 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 RIPK2O43353 540 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 KDELR3O43731 214 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 BANF1O75531 89 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 NEBLO76041 1014 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 SUN1O94901 812 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 AP2A1O95782 977 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 NUDT17P0C025 328 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 MLNP12872 115 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 MZF1P28698 734 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 VIPR2P41587 438 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 MAGEA3P43357 314 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 MMP13P45452 471 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 LMAN1P49257 510 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 NUMBP49757 651 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ARF5P84085 180 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CDK16Q00536 496 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 DLX2Q07687 328 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 LMAN2Q12907 356 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 PDIA2Q13087 525 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 CBLBQ13191 982 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 MTM1Q13496 603 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ADGRE1Q14246 886 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ZNF235Q14590 738 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 RFTN1Q14699 578 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 LBRQ14739 615 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 FASTKD3Q14CZ7 662 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 MSS51Q4VC12 460 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CFAP58Q5T655 872 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 MARC1Q5VT66 337 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 DENND2CQ68D51 928 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 KCTD11Q693B1 232 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 ASTLQ6HA08 431 aaPredicted RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 LEKR1Q6ZMV7 388 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 OTOP3Q7RTS5 596 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 CAND1Q86VP6 1230 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 ZBED8Q8IZ13 594 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 PDIK1LQ8N165 341 aa6.77□□□□□ -1.33
VPS41-204ENST00000413141 AGGF1Q8N302 714 aaeCLIP6.77□□□□□ -1.33
VPS41-204ENST00000413141 PDCD7Q8N8D1 485 aaKnown RBP6.77□□□□□ -1.33
VPS41-204ENST00000413141 NSMCE1Q8WV22 266 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms