RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 C1orf61Q13536 156 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PDE1CQ14123 709 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PTK2BQ14289 1009 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FGL2Q14314 439 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 DRAP1Q14919 205 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ELOCQ15369 112 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 DLG2Q15700 870 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KIF26BQ2KJY2 2108 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF284Q2VY69 593 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 DCAF6Q58WW2 860 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FAM133BQ5BKY9 247 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRRT3Q5FWE3 981 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MS4A13Q5J8X5 152 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PERM1Q5SV97 790 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FHL5Q5TD97 284 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CEP135Q66GS9 1140 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SEL1L3Q68CR1 1132 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ARHGAP17Q68EM7 881 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 HIST2H2BCQ6DN03 193 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 NADSYN1Q6IA69 706 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 OR6B2Q6IFH4 312 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KIAA1161Q6NSJ0 714 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MSANTD2Q6P1R3 559 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KYAT3Q6YP21 454 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 UNC13DQ70J99 1090 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ERN2Q76MJ5 926 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 EPM2AIP1Q7L775 607 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 BHLHA9Q7RTU4 235 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PTAR1Q7Z6K3 402 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 B3GNT8Q7Z7M8 397 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZSCAN30Q86W11 494 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZFAND4Q86XD8 727 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC9A9Q8IVB4 645 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC35F3Q8IY50 421 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PHACTR4Q8IZ21 702 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 APCDD1Q8J025 514 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 LGI2Q8N0V4 545 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCAR2Q8N163 923 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC22A18ASQ8N1D0 253 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CFAP52Q8N1V2 620 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SCML4Q8N228 414 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SDR16C5Q8N3Y7 309 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 IL22RA1Q8N6P7 574 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PDILTQ8N807 584 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ARL10Q8N8L6 244 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 IQUBQ8NA54 791 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TEX19Q8NA77 164 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMIEQ8NEW7 156 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 OR6C4Q8NGE1 309 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 C9orf43Q8TAL5 461 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLEKHO2Q8TD55 490 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 GPBAR1Q8TDU6 330 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SSC4DQ8WTU2 575 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FRS2Q8WU20 508 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 HTR3CQ8WXA8 447 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SCG3Q8WXD2 468 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 IRGQQ8WZA9 623 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 NDRG1Q92597 394 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 USP7Q93009 1102 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TATDN2Q93075 761 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 MIB2Q96AX9 1013 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP1R16AQ96I34 528 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FEM1CQ96JP0 617 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PPP1R13BQ96KQ4 1090 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 BMFQ96LC9 184 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TBATAQ96M53 351 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC114Q96M63 670 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRICKLE1Q96MT3 831 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLIC6Q96NY7 704 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SERPINB11Q96P15 392 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CATSPER2Q96P56 530 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 NOX5Q96PH1 765 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 PHF12Q96QT6 1004 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 GFM1Q96RP9 751 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 BOCQ9BWV1 1114 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC12A9Q9BXP2 914 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC17A9Q9BYT1 436 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 BACH2Q9BYV9 841 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FOXP3Q9BZS1 431 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC13A1Q9BZW2 595 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 B3GNT4Q9C0J1 378 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CDH19Q9H159 772 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 NUCKS1Q9H1E3 243 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CUEDC2Q9H467 287 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CAAP1Q9H8G2 361 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 APOBEC3GQ9HC16 384 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FZD3Q9NPG1 666 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF71Q9NQZ8 489 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 GPR27Q9NS67 375 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 KBTBD4Q9NVX7 518 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 CUEDC1Q9NWM3 386 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 AKAP7Q9P0M2 348 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 GULP1Q9UBP9 304 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 HESX1Q9UBX0 185 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 APOBEC3BQ9UH17 382 aaKnown RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC12A6Q9UHW9 1150 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC25A13Q9UJS0 675 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 FBXO2Q9UK22 296 aaPredicted RBP2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 TSPAN16Q9UKR8 245 aa2.43□□□□□ -2.02
RNU4-53P-201ENST00000410828 SARDHQ9UL12 918 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms