RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SLC39A11Q8N1S5 342 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TMEM199Q8N511 208 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 OTUD6BQ8N6M0 293 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 OR52K1Q8NGK4 314 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 LRRC8CQ8TDW0 803 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ACMSDQ8TDX5 336 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 AZIN2Q96A70 460 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 OXNAD1Q96HP4 312 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MYRFLQ96LU7 910 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ZNF512Q96ME7 567 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ELAC2Q9BQ52 826 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CLSTN3Q9BQT9 956 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 IQCGQ9H095 443 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 C11orf49Q9H6J7 331 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PRDM5Q9NQX1 630 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ENTPD7Q9NQZ7 604 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 RBM22Q9NW64 420 aaKnown RBP eCLIP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TRPM5Q9NZQ8 1165 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TXNDC16Q9P2K2 825 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MAGED2Q9UNF1 606 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 RPS6KL1Q9Y6S9 549 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TDRD15B5MCY1 1934 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ZNF840PA6NDX5 716 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 COPEO14579 308 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 KIAA0355O15063 1070 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 AXIN1O15169 862 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ADAM12O43184 909 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SNX3O60493 162 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 USP1O94782 785 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 BAIAP3O94812 1187 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 RAG1P15918 1043 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ATF6P18850 670 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TAC1P20366 129 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PPM1AP35813 382 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MAPKAPK2P49137 400 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SLC11A2P49281 568 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CORO7P57737 925 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CRADDP78560 199 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 VEPH1Q14D04 833 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 POLD3Q15054 466 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SLC1A5Q15758 541 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PARP15Q460N3 678 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 C5orf22Q49AR2 442 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ANKRD20A4Q4UJ75 823 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PCID2Q5JVF3 399 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 GRTP1Q5TC63 336 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MARC1Q5VT66 337 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 LVRNQ6Q4G3 990 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CCDC121Q6ZUS5 278 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MARK2Q7KZI7 788 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SRLQ86TD4 932 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TCP10LQ8TDR4 215 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ATP2A3Q93084 1043 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ARMC5Q96C12 935 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 VWCEQ96DN2 955 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 TRMT2BQ96GJ1 504 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 APOPT1Q96IL0 206 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 PAWRQ96IZ0 340 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SERAC1Q96JX3 654 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 RPRD1AQ96P16 312 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CPNE1Q99829 537 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 GORASP1Q9BQQ3 440 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MLPHQ9BV36 600 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 VN1R3Q9BXE9 311 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 NACA2Q9H009 215 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SLC25A51Q9H1U9 297 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 CCSER2Q9H7U1 834 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 KIF9Q9HAQ2 790 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 MLXIPLQ9NP71 852 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SMYD2Q9NRG4 433 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 VPS45Q9NRW7 570 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 NDFIP2Q9NV92 336 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 HAUS2Q9NVX0 235 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SYBUQ9NX95 663 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 ZFATQ9P243 1243 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 UXTQ9UBK9 157 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 SSX2IPQ9Y2D8 614 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 RRP15Q9Y3B9 282 aaKnown RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 STARD13Q9Y3M8 1113 aa6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 USP15Q9Y4E8 981 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-202ENST00000409364 COL4A4P53420 1690 aaPredicted RBP6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 CCT8L1PA6NM43 557 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 F5H5T6 163 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 GOLGA8RI6L899 631 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 C2CD2LO14523 706 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 GDF9O60383 454 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 ACSL4O60488 711 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 RAMP2O60895 175 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 USP12O75317 370 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 RFPL1O75677 317 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 SEC24AO95486 1093 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 URODP06132 367 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 HMBSP08397 361 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 ALADP13716 330 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 HMGA1P17096 107 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 RPL17P18621 184 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 TACR2P21452 398 aa6.38□□□□□ -1.39
GTF3C3-202ENST00000409364 OR1E1P30953 314 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms