RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 C10orf120Q5SQS8 335 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 ZNF621Q6ZSS3 439 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 TMEM17Q86X19 198 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.16
AFF3-202ENST00000409236 ART5Q96L15 291 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 CAV3P56539 151 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 PPP2R2BQ00005 443 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 TTC7BQ86TV6 843 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 WDCPQ9H6R7 721 aa14.04□□□□□ -0.16
AFF3-202ENST00000409236 NOL11Q9H8H0 719 aaKnown RBP14.04□□□□□ -0.16
AFF3-202ENST00000409236 PRAMEF33A0A0G2JMD5 474 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 F5H5T6 163 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 PRAMEF10O60809 474 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 LSM8O95777 96 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 PTPN3P26045 913 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 CHRNA5P30532 468 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ELF3P78545 371 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 SLC25A25Q6KCM7 469 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ZNF567Q8N184 647 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 RASGEF1AQ8N9B8 481 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 C9P02748 559 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ITGB6P18564 788 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 RAB26Q9ULW5 256 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 SCN8AQ9UQD0 1980 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 NEDD4P46934 1319 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 CDC42BPAQ5VT25 1732 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 PRKCBP05771 671 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 F8A1P23610 371 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 GNEQ9Y223 722 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 A0A0A6YYK5 440 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 OPLAHO14841 1288 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 BMP7P18075 431 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 MAGEA6P43360 314 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 MEA1Q16626 185 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ABCC10Q5T3U5 1492 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 NYAP1Q6ZVC0 841 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 FOXP4Q8IVH2 680 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 ZNF248Q8NDW4 579 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 RUSC1Q9BVN2 902 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 CCDC167Q9P0B6 97 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 DMGDHQ9UI17 866 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 PMF1-BGLAPU3KQ54 211 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 KRT33AO76009 404 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 NMT1P30419 496 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 GRK5P34947 590 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 GRIA3P42263 894 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 CCNG2Q16589 344 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 INSCQ1MX18 579 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 FNBP1LQ5T0N5 605 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 GPR107Q5VW38 600 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 TDRD10Q5VZ19 366 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 NELL1Q92832 810 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 LRMDAQ9H2I8 198 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 TMEM165Q9HC07 324 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 PIH1D3Q9NQM4 214 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 TTC3P53804 2025 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 CYP1A1P04798 512 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 MAPK10P53779 464 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 LMBRD2Q68DH5 695 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 STK40Q8N2I9 435 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ZFP28Q8NHY6 868 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 CHP1Q99653 195 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ATXN3LQ9H3M9 355 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 VPS4AQ9UN37 437 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 GRAP2O75791 330 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 FCER1AP12319 257 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 OGFRL1Q5TC84 451 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 CDYL2Q8N8U2 506 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ZNF398Q8TD17 642 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 ALDH8A1Q9H2A2 487 aaPredicted RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 USP17L5A8MUK1 530 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 F9P00740 461 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 SMU1Q2TAY7 513 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 CWF19L1Q69YN2 538 aaKnown RBP14.03□□□□□ -0.16
AFF3-202ENST00000409236 GTF3C4Q9UKN8 822 aa14.03□□□□□ -0.16
AFF3-202ENST00000409236 KCNK1O00180 336 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 PEPDP12955 493 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 PHC1P78364 1004 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 MED22Q15528 200 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 PSME2Q9UL46 239 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 USP18Q9UMW8 372 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 AP4E1Q9UPM8 1137 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 SRRM3A6NNA2 597 aaPredicted RBP14.02□□□□□ -0.16
AFF3-202ENST00000409236 PROCP04070 461 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 CYP2C9P11712 490 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 MFSD14CQ5VZR4 134 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 GPAT2Q6NUI2 795 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 SRBD1Q8N5C6 995 aaKnown RBP14.02□□□□□ -0.16
AFF3-202ENST00000409236 HM13Q8TCT9 377 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 NDNQ99608 321 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 PAK6Q9NQU5 681 aaPredicted RBP14.02□□□□□ -0.16
AFF3-202ENST00000409236 PIN4Q9Y237 131 aaKnown RBP14.02□□□□□ -0.16
AFF3-202ENST00000409236 ARL5CA6NH57 179 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 TCEAL6Q6IPX3 200 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 TESCQ96BS2 214 aa14.02□□□□□ -0.16
AFF3-202ENST00000409236 RBM4BQ9BQ04 359 aaKnown RBP14.02□□□□□ -0.16
AFF3-202ENST00000409236 RBM4Q9BWF3 364 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms