RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 MRPL41Q8IXM3 137 aaKnown RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 TERB1Q8NA31 727 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 AVL9Q8NBF6 648 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 SNRNP27Q8WVK2 155 aaKnown RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 PPCSQ9HAB8 311 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 CAMSAP1Q5T5Y3 1602 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 MUSKO15146 869 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 CDC25CP30307 473 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 CCKBRP32239 447 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 SLC15A2Q16348 729 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 ZNF792Q3KQV3 632 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 MDH1BQ5I0G3 518 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 FGD3Q5JSP0 725 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 CCSAPQ6IQ19 270 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 STYK1Q6J9G0 422 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 PROM2Q8N271 834 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 SLC44A5Q8NCS7 719 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 RASGRP4Q8TDF6 673 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 HEXDCQ8WVB3 486 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 PCDHB16Q9NRJ7 776 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 PHF24Q9UPV7 400 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 ZDHHC9Q9Y397 364 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 USP17L7P0C7H9 530 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 PLOD1Q02809 727 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 PHF19Q5T6S3 580 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 SLC13A5Q86YT5 568 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 TM9SF4Q92544 642 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 ELMO1Q92556 727 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 MTMR8Q96EF0 704 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 PARD6BQ9BYG5 372 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 TM6SF1Q9BZW5 370 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 ZDHHC6Q9H6R6 413 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 AP4E1Q9UPM8 1137 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 XKRYO14609 159 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 MFAP3LO75121 409 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 IL12BP29460 328 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 TCHHL1Q5QJ38 904 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 ZMYM1Q5SVZ6 1142 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 SCIMPQ6UWF3 145 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 MTMR9Q96QG7 549 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 RWDD2AQ9UIY3 292 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 SNX24Q9Y343 169 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 LYVE1Q9Y5Y7 322 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 L7N2F9 121 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 MAFKO60675 156 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 ITGAVP06756 1048 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 USP11P51784 963 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 PRMT2P55345 433 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 VAMP2P63027 116 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 TMEM35AQ53FP2 167 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 USP50Q70EL3 339 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 PTAR1Q7Z6K3 402 aaPredicted RBP3.44□□□□□ -1.86
NEB-204ENST00000409198 CACUL1Q86Y37 369 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 FEM1CQ96JP0 617 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 FTHL17Q9BXU8 183 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 BRF2Q9HAW0 419 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 RAB9BQ9NP90 201 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 RAB6BQ9NRW1 208 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 GMIPQ9P107 970 aa3.44□□□□□ -1.86
NEB-204ENST00000409198 ATG7O95352 703 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 IL1BP01584 269 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 CYP1A1P04798 512 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 FAUP35544 74 aaKnown RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 PSMD7P51665 324 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 WDR45BQ5MNZ6 344 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 ILDR2Q71H61 639 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 SYT12Q8IV01 421 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 THOC1Q96FV9 657 aaKnown RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 NSMCE3Q96MG7 304 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 FBXW2Q9UKT8 454 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 MFHAS1Q9Y4C4 1052 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 USP15Q9Y4E8 981 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 SLC26A4O43511 780 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 IL33O95760 270 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 C12orf60Q5U649 245 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 PSRC1Q6PGN9 363 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 DEF8Q6ZN54 512 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 ERO1BQ86YB8 467 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 SH3RF3Q8TEJ3 882 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 FBXW5Q969U6 566 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 CPNE2Q96FN4 548 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 AIFM2Q9BRQ8 373 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 IL1RL2Q9HB29 575 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 ARL8BQ9NVJ2 186 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 COMMD8Q9NX08 183 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 KLK14Q9P0G3 267 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 ZNF180Q9UJW8 692 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 IDH3BO43837 385 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 ADSLP30566 484 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 ZC3H7AQ8IWR0 971 aaKnown RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 GRIN3AQ8TCU5 1115 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 ATOH1Q92858 354 aaPredicted RBP3.43□□□□□ -1.86
NEB-204ENST00000409198 SLC38A2Q96QD8 506 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 DDIT4Q9NX09 232 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 CPS1P31327 1500 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 A0A1B0GTH6 734 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 FAM172BPA6NC97 362 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 POTECB2RU33 542 aa3.43□□□□□ -1.86
NEB-204ENST00000409198 DBIP07108 87 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms