RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 I6L893 689 aaPredicted RBP17.13■□□□□ 0.33
SYNC-202ENST00000409190 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
SYNC-202ENST00000409190 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
SYNC-202ENST00000409190 C4orf22Q6V702 233 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 PSTKQ8IV42 348 aaKnown RBP17.13■□□□□ 0.33
SYNC-202ENST00000409190 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 RTKNQ9BST9 563 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 RHBDL2Q9NX52 303 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 GMPR2Q9P2T1 348 aaKnown RBP17.13■□□□□ 0.33
SYNC-202ENST00000409190 PSMD13Q9UNM6 376 aa17.13■□□□□ 0.33
SYNC-202ENST00000409190 KCNU1A8MYU2 1149 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 CNMDO75829 334 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 SOX4Q06945 474 aaPredicted RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 GRIK4Q16099 956 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 SLC25A52Q3SY17 297 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 SH2D4BQ5SQS7 431 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 FSTL5Q8N475 847 aaPredicted RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 EME1Q96AY2 570 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 PPWD1Q96BP3 646 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 NXNL1Q96CM4 212 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 SLC39A3Q9BRY0 314 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 ULBP1Q9BZM6 244 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 CCDC167Q9P0B6 97 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 LCTP09848 1927 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 YJEFN3A6XGL0 299 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 HDAC3O15379 428 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 MLNP12872 115 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 HNRNPDQ14103 355 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 SPANXN3Q5MJ09 141 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 METTL25Q8N6Q8 603 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 GRIN3AQ8TCU5 1115 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 SERPINI1Q99574 410 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 MLPHQ9BV36 600 aaPredicted RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 MRPL1Q9BYD6 325 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 NUDT5Q9UKK9 219 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 BPTFQ12830 3046 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 RGSL1A5PLK6 1076 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 TPST1O60507 370 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 HUS1O60921 280 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 PRAMEP78395 509 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 MAP3K21Q5TCX8 1036 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 ARHGAP36Q6ZRI8 547 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 DIS3LQ8TF46 1054 aaKnown RBP17.12■□□□□ 0.33
SYNC-202ENST00000409190 PHF21BQ96EK2 531 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 ZFP42Q96MM3 310 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 TRPV6Q9H1D0 765 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 CDYLQ9Y232 598 aa17.12■□□□□ 0.33
SYNC-202ENST00000409190 C9IYK1 514 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 PMPCBO75439 489 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 FBXO21O94952 628 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 GJA9P57773 515 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 COG7P83436 770 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 MAP7Q14244 749 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 PCSK7Q16549 785 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 NOMO2Q5JPE7 1267 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 WSCD1Q658N2 575 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 NT5DC4Q86YG4 428 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 SIKE1Q9BRV8 207 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 ANKRD12Q6UB98 2062 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 CCL22O00626 93 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 TFAP2AP05549 437 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 CD68P34810 354 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 ZNF484Q5JVG2 852 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 OTUD1Q5VV17 481 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 IL23RQ5VWK5 629 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 ABTB1Q969K4 478 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 LENG1Q96BZ8 264 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 SLC2A6Q9UGQ3 507 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 SNX13Q9Y5W8 968 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 SETSIPP0DME0 302 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 INHBCP55103 352 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 USP46P62068 366 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 SNAPC2Q13487 334 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 C11orf84Q9BUA3 381 aaPredicted RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 STN1Q9H668 368 aaKnown RBP17.11■□□□□ 0.33
SYNC-202ENST00000409190 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
SYNC-202ENST00000409190 ANK1P16157 1881 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 MATN2O00339 956 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 AURKAO14965 403 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 PABPC4LP0CB38 370 aaKnown RBP17.1■□□□□ 0.33
SYNC-202ENST00000409190 SMIM18P0DKX4 95 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 GRM5P41594 1212 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 C16orf89Q6UX73 402 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 ADGRG6Q86SQ4 1221 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 B3GALNT2Q8NCR0 500 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 ELMO2Q96JJ3 720 aa17.1■□□□□ 0.33
SYNC-202ENST00000409190 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms