RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 EPHB6O15197 1021 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 LATO43561 262 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 BNIP3LO60238 219 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SH3BP5O60239 455 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 PCDHGA12O60330 932 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 RAMP2O60895 175 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 RHOQP17081 205 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 CHRNB2P17787 502 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 TNFAIP3P21580 790 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 CHRNA3P32297 505 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 CTSKP43235 329 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 ZNF165P49910 485 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SERPINH1P50454 418 aaKnown RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 IRAK1P51617 712 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 ZNF143P52747 638 aaPredicted RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 GNA12Q03113 381 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SCAPQ12770 1279 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 NCAPHQ15003 741 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 POLD3Q15054 466 aaPredicted RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 KIF19Q2TAC6 998 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 ALFQ53S48 1182 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 C2CD6Q53TS8 623 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 RWDD4Q6NW29 188 aaKnown RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 IQCHQ86VS3 1027 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 DRC7Q8IY82 874 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 AADATQ8N5Z0 425 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 EMC1Q8N766 993 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SLC30A5Q8TAD4 765 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 FAM174AQ8TBP5 190 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 FAM172AQ8WUF8 416 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 CASKIN2Q8WXE0 1202 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 IQCDQ96DY2 449 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 TRIM11Q96F44 468 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 LRIG1Q96JA1 1093 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SERAC1Q96JX3 654 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 EIF3CQ99613 913 aaKnown RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 EPAS1Q99814 870 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 EDEM3Q9BZQ6 932 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 MAGEH1Q9H213 219 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 CATSPERBQ9H7T0 1116 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 MPP6Q9NZW5 540 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SERGEFQ9UGK8 458 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 FNDC3AQ9Y2H6 1198 aaKnown RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 PCNX2A6NKB5 2137 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 NUMA1Q14980 2115 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 PRAMEF26H0Y7S4 382 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 FGF10O15520 208 aaPredicted RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 PROS1P07225 676 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CDK4P11802 303 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 L1CAMP32004 1257 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 DRD3P35462 400 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 NEK3P51956 506 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 RAD51Q06609 339 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CNTN1Q12860 1018 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 STAT4Q14765 748 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ASIC2Q16515 512 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 C15orf59Q2T9L4 293 aaPredicted RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 MANEALQ5VSG8 457 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 AGBL4Q5VU57 503 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 UNQ6494/PRO21346Q6UXR6 183 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 MON1BQ7L1V2 547 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 APTXQ7Z2E3 356 aaKnown RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 SLFN11Q7Z7L1 901 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 VPS36Q86VN1 386 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 PLPP6Q8IY26 295 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 MFSD2AQ8NA29 543 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 OR52K2Q8NGK3 314 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 OR2A12Q8NGT7 310 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 OR2I1PQ8NGU4 316 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 RHBDD1Q8TEB9 315 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ADAMTS14Q8WXS8 1223 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CENPIQ92674 756 aaPredicted RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ISG20Q96AZ6 181 aaKnown RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ARHGEF26Q96DR7 871 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 PSMB7Q99436 277 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ELF4Q99607 663 aaPredicted RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CNPY3Q9BT09 278 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 HDAC8Q9BY41 377 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ERVMER34-1Q9H9K5 563 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 RTN4Q9NQC3 1192 aaKnown RBP9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 ANLNQ9NQW6 1124 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 PARVAQ9NVD7 372 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 TMEM248Q9NWD8 314 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 TMEM63CQ9P1W3 806 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 IL36AQ9UHA7 158 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 PCOLCE2Q9UKZ9 415 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 SNX11Q9Y5W9 270 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 SCINQ9Y6U3 715 aa9.28□□□□□ -0.92
SNORD88A-201ENST00000408314 CACNA1BQ00975 2339 aa9.27□□□□□ -0.92
SNORD88A-201ENST00000408314 DOCK4Q8N1I0 1966 aa9.27□□□□□ -0.93
SNORD88A-201ENST00000408314 A0A0D9SEW6 157 aa9.27□□□□□ -0.93
SNORD88A-201ENST00000408314 A0A1B0GTQ1 180 aa9.27□□□□□ -0.93
SNORD88A-201ENST00000408314 I6L893 689 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms