RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 SHOX2O60902 331 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FKBP6O75344 327 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ESRRBO95718 433 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 AP2A1O95782 977 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 INHAP05111 366 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC10A3P09131 477 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 HSPA1AP0DMV8 641 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 HSPA1BP0DMV9 641 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PROZP22891 400 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TARSP26639 723 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TKTP29401 623 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SERPINA4P29622 427 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CDC25CP30307 473 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 RPA3P35244 121 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PIK3CGP48736 1102 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MAPKAPK2P49137 400 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NDST2P52849 883 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TRIP4Q15650 581 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TRMT5Q32P41 509 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 LYPLAL1Q5VWZ2 237 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FBXW10Q5XX13 1052 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ANKS6Q68DC2 871 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FUT10Q6P4F1 479 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ZDHHC24Q6UX98 284 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PACS1Q6VY07 963 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 UNC5AQ6ZN44 842 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 GLT6D1Q7Z4J2 308 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MTDHQ86UE4 582 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SNX31Q8N9S9 440 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PCDH19Q8TAB3 1148 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 RIN3Q8TB24 985 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC35F5Q8WV83 523 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 USP6NLQ92738 828 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CD101Q93033 1021 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PANX3Q96QZ0 392 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PRPF18Q99633 342 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TMEM175Q9BSA9 504 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 GPR88Q9GZN0 384 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 XYLT2Q9H1B5 865 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 OSBPL2Q9H1P3 480 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MRPL46Q9H2W6 279 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 DPEP3Q9H4B8 488 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CDHR5Q9HBB8 845 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NOD2Q9HC29 1040 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TCF7L2Q9NQB0 619 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 THG1LQ9NWX6 298 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SMPD4Q9NXE4 827 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 IGSF9Q9P2J2 1179 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MOSPD1Q9UJG1 213 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NR2E1Q9Y466 385 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TNRC6CQ9HCJ0 1690 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RNF103-CHMP3A0A140T963 221 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 A0A1W2PQH9 124 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 KANSL1LA0AUZ9 987 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ARVCFO00192 962 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PIRO00625 290 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RAD51BO15315 384 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 MFSD11O43934 449 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RNASEH1O60930 286 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 USP12O75317 370 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ITGA2BP08514 1039 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ERVK-10P10266 1014 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 FGFR1P11362 822 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HDCP19113 662 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ATP5F1P24539 256 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CCL23P55773 120 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 WNT3AP56704 352 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TAF10Q12962 218 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CYLC2Q14093 348 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HIST2H2ACQ16777 129 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 DDR2Q16832 855 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CACHD1Q5VU97 1274 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HIST2H2AA3Q6FI13 130 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PKN3Q6P5Z2 889 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ADGRD1Q6QNK2 874 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 AFTPHQ6ULP2 937 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TTC30AQ86WT1 665 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 KIF2BQ8N4N8 673 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 VPS37AQ8NEZ2 397 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TUBGCP3Q96CW5 907 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 OXNAD1Q96HP4 312 aaPredicted RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CCDC138Q96M89 665 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 DEFB118Q96PH6 123 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 TWNKQ96RR1 684 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ZCCHC2Q9C0B9 1178 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 GBA3Q9H227 469 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RHOJQ9H4E5 214 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 DCLRE1BQ9H816 532 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 PTPRHQ9HD43 1115 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 CATSPERZQ9NTU4 200 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ABCF3Q9NUQ8 709 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 HAO1Q9UJM8 370 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 NUDT5Q9UKK9 219 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 RPL26L1Q9UNX3 145 aaKnown RBP4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 ZNF831Q5JPB2 1677 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 DOCK2Q92608 1830 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 FAM237BA0A1B0GVD1 139 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 A0A1W2PQ67 120 aa4.81□□□□□ -1.64
PCDH11X-207ENST00000406881 AGPSO00116 658 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms