RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 MAPKAPK2P49137 400 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 VASPP50552 380 aaPredicted RBP18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 DNA2P51530 1060 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 ATXN3P54252 364 aaPredicted RBP18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 ARF5P84085 180 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 CA9Q16790 459 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 SPECC1LQ69YQ0 1117 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 RETSATQ6NUM9 610 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 C22orf39Q6P5X5 142 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 NCEH1Q6PIU2 408 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 RABEPKQ7Z6M1 372 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 DSG4Q86SJ6 1040 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 ZNF354CQ86Y25 554 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 DNASE2BQ8WZ79 361 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 BIRC7Q96CA5 298 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 PEBP4Q96S96 227 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 THAP2Q9H0W7 228 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 CAPN10Q9HC96 672 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 SUSD2Q9UGT4 822 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 FCF1Q9Y324 198 aaKnown RBP18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 SCINQ9Y6U3 715 aa18.57■□□□□ 0.56
PTPRN2-204ENST00000404321 MED19A0JLT2 244 aaPredicted RBP18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 RAMP2O60895 175 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 GOT1P17174 413 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 SERPINH1P50454 418 aaKnown RBP18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 GALCP54803 685 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 ERMP1Q7Z2K6 904 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 RTL3Q8N8U3 475 aaKnown RBP18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 CHST14Q8NCH0 376 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 OR2A12Q8NGT7 310 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 OR14C36Q8NHC7 312 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 PIP4K2CQ8TBX8 421 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 EPAS1Q99814 870 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 ACE2Q9BYF1 805 aaPredicted RBP18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 DHX35Q9H5Z1 703 aaKnown RBP18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 PPM1HQ9ULR3 514 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 AP4E1Q9UPM8 1137 aa18.56■□□□□ 0.56
PTPRN2-204ENST00000404321 A0A1B0GTW7 788 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 MCF2LO15068 1137 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 BCAT2O15382 392 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 RNF8O76064 485 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 CTSLP07711 333 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 MIPP30301 263 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 DRD3P35462 400 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 EIF4A3P38919 411 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 AIF1P55008 147 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 SFSWAPQ12872 951 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 POLD3Q15054 466 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 PPM1JQ5JR12 505 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 KIAA0895LQ68EN5 471 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 GRIN3AQ8TCU5 1115 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 ARHGEF2Q92974 986 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 BTBD6Q96KE9 485 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 SNRNP25Q9BV90 132 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 PCED1AQ9H1Q7 454 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 MRPL47Q9HD33 250 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 FZD4Q9ULV1 537 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 NUP205Q92621 2012 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 NUMA1Q14980 2115 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 LAMA1P25391 3075 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 TNRC6BQ9UPQ9 1833 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 C1QTNF3-AMACRE9PGA6 284 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 RNF103O00237 685 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 ARHGAP33O14559 1287 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 TM4SF5O14894 197 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 PRPSAP2O60256 369 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 IGHV4-34P06331 123 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 CHRNA3P32297 505 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 ETFBP38117 255 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 CLCN6P51797 869 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 ADPRHP54922 357 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 TPI1P60174 286 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 CNTN1Q12860 1018 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 SEMA3BQ13214 749 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 CCDC122Q5T0U0 273 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 FAM46CQ5VWP2 391 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 ALKBH5Q6P6C2 394 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 LAYNQ6UX15 382 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 DPY19L3Q6ZPD9 716 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 VSTM4Q8IW00 320 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 NETO2Q8NC67 525 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 ARHGEF26Q96DR7 871 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 CCDC114Q96M63 670 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 TM6SF2Q9BZW4 377 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 MAGEH1Q9H213 219 aa18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 NOL6Q9H6R4 1146 aaKnown RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 FARP1Q9Y4F1 1045 aaPredicted RBP18.55■□□□□ 0.56
PTPRN2-204ENST00000404321 SPTBN2O15020 2390 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 CACNA1AO00555 2505 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 LRRC72A6NJI9 287 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 KPNA3O00505 521 aaPredicted RBP18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 LRCH4O75427 683 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 ZNF821O75541 412 aaPredicted RBP18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 CD160O95971 181 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 TCF4P15884 667 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 RECQLP46063 649 aaPredicted RBP18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 CSNK1EP49674 416 aaKnown RBP18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 GRIK2Q13002 908 aa18.54■□□□□ 0.56
PTPRN2-204ENST00000404321 PPP6R3Q5H9R7 873 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms