RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 STK25O00506 426 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 CD160O95971 181 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 RBP3P10745 1247 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 CCNCP24863 283 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 XRCC4Q13426 336 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 EGFLAMQ63HQ2 1017 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 TFB1MQ8WVM0 346 aaKnown RBP33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 MRGPRX3Q96LB0 322 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 SLCO3A1Q9UIG8 710 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 DNPEPQ9ULA0 475 aa33.95■■■■□ 3.03
CSNK1E-204ENST00000403904 ZSCAN5CA6NGD5 496 aaPredicted RBP33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 KIR2DL1P43626 348 aaPredicted RBP33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 CCDC13Q8IYE1 715 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 PRELID2Q8N945 189 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 BRD8Q9H0E9 1235 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 RNF14Q9UBS8 474 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 FAM170BA6NMN3 283 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 K7ERQ8 282 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 KRIT1O00522 736 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 PEX11BO96011 259 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 TIE1P35590 1138 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 PAFAH1B1P43034 410 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 SNX1Q13596 522 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 PRKD1Q15139 912 aaPredicted RBP33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 C2orf27AQ580R0 203 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 ZNF513Q8N8E2 541 aaPredicted RBP33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 ATP11CQ8NB49 1132 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 SLC35B2Q8TB61 432 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 MYO19Q96H55 970 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 QKIQ96PU8 341 aaKnown RBP eCLIP33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 UBA2Q9UBT2 640 aaPredicted RBP33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 CDC23Q9UJX2 597 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 HS3ST2Q9Y278 367 aa33.94■■■■□ 3.02
CSNK1E-204ENST00000403904 HACD1B0YJ81 288 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 LIASO43766 372 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 SRPRAP08240 638 aaKnown RBP33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 CHRNB1P11230 501 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 ZNF234Q14588 700 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 CCNG2Q16589 344 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 SLC45A4Q5BKX6 768 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 FAM182AQ5T1J6 154 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 TIGD7Q6NT04 549 aaPredicted RBP33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 ACOX2Q99424 681 aa33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 THAP10Q9P2Z0 257 aaPredicted RBP33.93■■■■□ 3.02
CSNK1E-204ENST00000403904 MATN3O15232 486 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 SMAD6O43541 496 aaKnown RBP33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 RNF40O75150 1001 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 SRCP12931 536 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 ALADP13716 330 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 VAV1P15498 845 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 SERPINH1P50454 418 aaKnown RBP33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 ZNF33AQ06730 810 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 SLC20A2Q08357 652 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 FBXO43Q4G163 708 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 FNDC3BQ53EP0 1204 aaKnown RBP33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 DARS2Q6PI48 645 aaKnown RBP33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 TRIM67Q6ZTA4 783 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 SH2D3CQ8N5H7 860 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 NELL2Q99435 816 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 FRMD8P1Q9BZ68 369 aaPredicted RBP33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 LMAN1LQ9HAT1 526 aa33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 MUC22E2RYF6 1773 aaPredicted RBP33.92■■■■□ 3.02
CSNK1E-204ENST00000403904 TECTAO75443 2155 aa33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 KCNK1O00180 336 aa33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 CHRM1P11229 460 aaPredicted RBP33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 GEMIN4P57678 1058 aaKnown RBP33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 ST8SIA6P61647 398 aa33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 SLC10A7Q0GE19 358 aa33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 FCF1Q9Y324 198 aaKnown RBP33.91■■■■□ 3.02
CSNK1E-204ENST00000403904 WASH3PC4AMC7 463 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 HNRNPLP14866 589 aaKnown RBP eCLIP33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 RBL1P28749 1068 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 NNMTP40261 264 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 CLCN6P51797 869 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 FZD5Q13467 585 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 BYSLQ13895 437 aaKnown RBP33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 DNTTIP2Q5QJE6 756 aaKnown RBP33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 NSMCE1Q8WV22 266 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 ZNF599Q96NL3 588 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 MFSD1Q9H3U5 465 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 CACNA2D2Q9NY47 1150 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 SEPT10Q9P0V9 454 aa33.9■■■■□ 3.02
CSNK1E-204ENST00000403904 CXorf51AA0A1B0GTR3 108 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 PDGFBP01127 241 aaPredicted RBP33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 IL12RB1P42701 662 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 LBRQ14739 615 aaKnown RBP33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 ACCSLQ4AC99 568 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 INO80DQ53TQ3 878 aaPredicted RBP33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 DGKKQ5KSL6 1271 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 TMCO4Q5TGY1 634 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 CDKL3Q8IVW4 592 aaPredicted RBP33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 CHPFQ8IZ52 775 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 ZNF366Q8N895 744 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 FLCNQ8NFG4 579 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 USP33Q8TEY7 942 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 HOMER3Q9NSC5 361 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 TTC34A8MYJ7 566 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 TMCC1O94876 653 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 CCNB1P14635 433 aa33.89■■■■□ 3.02
CSNK1E-204ENST00000403904 OASLQ15646 514 aaKnown RBP33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms