RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 FGF19O95750 216 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 MGAT1P26572 445 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 ATP5DP30049 168 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 HOXA9P31269 272 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 CCR2P41597 374 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 ATP1A2P50993 1020 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 SGSHP51688 502 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 PPP2R2AP63151 447 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 GNA12Q03113 381 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 TNK2Q07912 1038 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 UNC5AQ6ZN44 842 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 HTR3DQ70Z44 454 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 SETD3Q86TU7 594 aaPredicted RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 EXOC3L1Q86VI1 746 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 CCNJLQ8IV13 435 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 SPATA22Q8NHS9 363 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 PABPC5Q96DU9 382 aaKnown RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 TMA16Q96EY4 203 aaKnown RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 STAMBPL1Q96FJ0 436 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 PIH1D1Q9NWS0 290 aaKnown RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 PSD3Q9NYI0 1048 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 DNMT3BQ9UBC3 853 aaKnown RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 TBK1Q9UHD2 729 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 TBC1D30Q9Y2I9 924 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 YBX2Q9Y2T7 364 aaKnown RBP13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 TTLL3Q9Y4R7 772 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 MYO7AQ13402 2215 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 ANAPC1Q9H1A4 1944 aa13.55□□□□□ -0.24
CEACAM1-206ENST00000403136 ILVBLA1L0T0 632 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 AP3B1O00203 1094 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 GFRA2O00451 464 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 PER2O15055 1255 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 HNRNPA1P09651 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 NPY2RP49146 381 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 GEMP55040 296 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 STXBP5Q5T5C0 1151 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 TTC39BQ5VTQ0 682 aaPredicted RBP13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 NAPEPLDQ6IQ20 393 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 CASC4Q6P4E1 433 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 CYS1Q717R9 158 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 LINC00523Q86TU6 105 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 DNAAF3Q8N9W5 541 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 OR7D4Q8NG98 312 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 OR52K2Q8NGK3 314 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 SHKBP1Q8TBC3 707 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 MRRFQ96E11 262 aaKnown RBP13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 NAT9Q9BTE0 207 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 DHRS4Q9BTZ2 278 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 SLC25A51Q9H1U9 297 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 NT5MQ9NPB1 228 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 BFARQ9NZS9 450 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 ZNF510Q9Y2H8 683 aa13.54□□□□□ -0.24
CEACAM1-206ENST00000403136 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 PIAS1O75925 651 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 MT-CYBP00156 380 aaPredicted RBP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 C1QAP02745 245 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 RHOCP08134 193 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 PRKCHP24723 683 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 STX2P32856 288 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 MSH2P43246 934 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 CRADDP78560 199 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 KBTBD12Q3ZCT8 623 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 ADGRD1Q6QNK2 874 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 PRPF39Q86UA1 669 aaKnown RBP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 FAM217AQ8IXS0 508 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 GSDMBQ8TAX9 411 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 TCEAL4Q96EI5 215 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 ZNF599Q96NL3 588 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 SPON2Q9BUD6 331 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 SYBUQ9NX95 663 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 DPP7Q9UHL4 492 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 SH3BP1Q9Y3L3 701 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 SHROOM3Q8TF72 1996 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 MAGEB16A2A368 324 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 A6NNZ2 444 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 KDELR3O43731 214 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 TBL1XO60907 577 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 XYLBO75191 536 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 MOSPD3O75425 235 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 RHOP08100 348 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 HOXD9P28356 352 aaPredicted RBP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 PBX2P40425 430 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 ITKQ08881 620 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 CDH17Q12864 832 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 LBRQ14739 615 aaKnown RBP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 EFTUD2Q15029 972 aaKnown RBP eCLIP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 TUBB8Q3ZCM7 444 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 GPR158Q5T848 1215 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 IL31Q6EBC2 164 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 LEKR1Q6ZMV7 388 aa13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 RBM23Q86U06 439 aaKnown RBP13.53□□□□□ -0.24
CEACAM1-206ENST00000403136 LEMD2Q8NC56 503 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms