RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KDELR3O43731 214 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 ZNF821O75541 412 aaPredicted RBP19.61■□□□□ 0.73
RTN4-207ENST00000402434 PTGER3P43115 390 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 SERPINH1P50454 418 aaKnown RBP19.61■□□□□ 0.73
RTN4-207ENST00000402434 DPYSQ14117 519 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 PARP15Q460N3 678 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 PLA2G2CQ5R387 149 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 USP30Q70CQ3 517 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 POLNQ7Z5Q5 900 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 MMAAQ8IVH4 418 aaKnown RBP19.61■□□□□ 0.73
RTN4-207ENST00000402434 OR2A12Q8NGT7 310 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 ZNF419Q96HQ0 510 aaPredicted RBP19.61■□□□□ 0.73
RTN4-207ENST00000402434 CEP44Q9C0F1 390 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 KLC2Q9H0B6 622 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 PABPC3Q9H361 631 aaKnown RBP19.61■□□□□ 0.73
RTN4-207ENST00000402434 LRRC19Q9H756 370 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 PARD6AQ9NPB6 346 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.61■□□□□ 0.73
RTN4-207ENST00000402434 HPCAL4Q9UM19 191 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 CFAP54Q96N23 3096 aa19.61■□□□□ 0.73
RTN4-207ENST00000402434 ERCC2P18074 760 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 SLC8A1P32418 973 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 MAN1A1P33908 653 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 ARHGAP25P42331 645 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 DHPSP49366 369 aaPredicted RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 NDST2P52849 883 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 GEMIN4P57678 1058 aaKnown RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 SPEM2Q0P670 501 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 SERINC3Q13530 473 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 HADHQ16836 314 aaKnown RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 TTC31Q49AM3 519 aaPredicted RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 DSG4Q86SJ6 1040 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 TMTC1Q8IUR5 882 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 CADM4Q8NFZ8 388 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 FAM71BQ8TC56 605 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 ISG20Q96AZ6 181 aaKnown RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 SEMA4GQ9NTN9 838 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 PPM1HQ9ULR3 514 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 CEP192Q8TEP8 1941 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 ZSCAN5CA6NGD5 496 aaPredicted RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 RASA4BC9J798 803 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 MID1O15344 667 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 DAPK3O43293 454 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 RASA4O43374 803 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 NDUFS2O75306 463 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 ADH1BP00325 375 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 C5AR1P21730 350 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 CYLC1P35663 651 aaPredicted RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 MPLP40238 635 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 MAGEA1P43355 309 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 CREB5Q02930 508 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 ZNF33AQ06730 810 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 CSRP2Q16527 193 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 AFMIDQ63HM1 303 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 C22orf39Q6P5X5 142 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 CPNE8Q86YQ8 564 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 SLC41A1Q8IVJ1 513 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 PLPP6Q8IY26 295 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 OR8D1Q8WZ84 308 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 TSC1Q92574 1164 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 HSPH1Q92598 858 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 HMCESQ96FZ2 354 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 GPR174Q9BXC1 333 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 PCED1AQ9H1Q7 454 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 PCDH18Q9HCL0 1135 aa19.6■□□□□ 0.73
RTN4-207ENST00000402434 EPN1Q9Y6I3 576 aaPredicted RBP19.6■□□□□ 0.73
RTN4-207ENST00000402434 H3BRJ5 948 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 IL1BP01584 269 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 ZNF806P0C7X5 589 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 ACSL1P33121 698 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 ARL4AP40617 200 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 ARSEP51690 589 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 SFSWAPQ12872 951 aaKnown RBP19.59■□□□□ 0.73
RTN4-207ENST00000402434 SPA17Q15506 151 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 LYSMD4Q5XG99 296 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 FAM124AQ86V42 546 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 PCDH20Q8N6Y1 951 aaKnown RBP19.59■□□□□ 0.73
RTN4-207ENST00000402434 FOXJ1Q92949 421 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 CCDC114Q96M63 670 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 CSPG4P5Q96PW8 444 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 FBXL12Q9NXK8 326 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 SARDHQ9UL12 918 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 FARP1Q9Y4F1 1045 aaPredicted RBP19.59■□□□□ 0.73
RTN4-207ENST00000402434 PCDHA13Q9Y5I0 950 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 ACTL7AQ9Y615 435 aa19.59■□□□□ 0.73
RTN4-207ENST00000402434 NYNRINQ9P2P1 1898 aaKnown RBP19.58■□□□□ 0.72
RTN4-207ENST00000402434 SOWAHDA6NJG2 315 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 NDUFA10O95299 355 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 IL4RP24394 825 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 SSR1P43307 286 aaKnown RBP19.58■□□□□ 0.72
RTN4-207ENST00000402434 PSMD8P48556 350 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 HADHBP55084 474 aaKnown RBP19.58■□□□□ 0.72
RTN4-207ENST00000402434 TAS2R40P59535 323 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 MESDQ14696 234 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 INO80DQ53TQ3 878 aaPredicted RBP19.58■□□□□ 0.72
RTN4-207ENST00000402434 PEAR1Q5VY43 1037 aaPredicted RBP19.58■□□□□ 0.72
RTN4-207ENST00000402434 CYP2U1Q7Z449 544 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 SYT12Q8IV01 421 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 AADATQ8N5Z0 425 aa19.58■□□□□ 0.72
RTN4-207ENST00000402434 LZTR1Q8N653 840 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms