RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CHD5Q8TDI0 1954 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 PSMD3O43242 534 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 RENBPP51606 427 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 ZNF354CQ86Y25 554 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 TEX26Q8N6G2 289 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 MAB21L3Q8N8X9 362 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 MDM1Q8TC05 714 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 MICAL1Q8TDZ2 1067 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 PABPC5Q96DU9 382 aaKnown RBP26.11■■□□□ 1.77
CPNE1-205ENST00000401607 APOL2Q9BQE5 337 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 CORO1BQ9BR76 489 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 SMYD2Q9NRG4 433 aa26.11■■□□□ 1.77
CPNE1-205ENST00000401607 A0A0D9SEW6 157 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 A0A1W2PRU2 124 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 TSPAN3O60637 253 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 CLDN11O75508 207 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 RB1P06400 928 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 GJA1P17302 382 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 CDC25CP30307 473 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 MSH2P43246 934 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 TNK2Q07912 1038 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 CASC4Q6P4E1 433 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 TRMT10BQ6PF06 316 aaKnown RBP26.1■■□□□ 1.77
CPNE1-205ENST00000401607 Q6ZNB5 142 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 CHST9Q7L1S5 443 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 TRABD2AQ86V40 505 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 SLC44A1Q8WWI5 657 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 DDX50Q9BQ39 737 aaKnown RBP26.1■■□□□ 1.77
CPNE1-205ENST00000401607 ATXN3LQ9H3M9 355 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 LAMA2P24043 3122 aaKnown RBP26.1■■□□□ 1.77
CPNE1-205ENST00000401607 CXorf49A8MYA2 514 aaPredicted RBP26.1■■□□□ 1.77
CPNE1-205ENST00000401607 SCAMP3O14828 347 aaKnown RBP26.1■■□□□ 1.77
CPNE1-205ENST00000401607 PRAMEF11O60813 436 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 ANXA9O76027 345 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 MYL4P12829 197 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 PGAM1P18669 254 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 GNA12Q03113 381 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 STXBP5Q5T5C0 1151 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 MARC1Q5VT66 337 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 NAPEPLDQ6IQ20 393 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 MAGEH1Q9H213 219 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 PDFQ9HBH1 243 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 ASAH2Q9NR71 780 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 HCFC1R1Q9NWW0 138 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 ACTL7BQ9Y614 415 aa26.1■■□□□ 1.77
CPNE1-205ENST00000401607 A0A1B0GVM2 712 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 TCAF2A6NFQ2 919 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 A6NNZ2 444 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 RFPL2O75678 378 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 NEBLO76041 1014 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 CA3P07451 260 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 HOXD9P28356 352 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-205ENST00000401607 SLC7A9P82251 487 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 NR1H3Q13133 447 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 TUBB8Q3ZCM7 444 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 CCNJLQ8IV13 435 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 SRRM1Q8IYB3 904 aaKnown RBP26.09■■□□□ 1.77
CPNE1-205ENST00000401607 DNAAF3Q8N9W5 541 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 OR7D4Q8NG98 312 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 PPP1R2P1Q96PQ5 205 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 NT5MQ9NPB1 228 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 MAN1C1Q9NR34 630 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 MOCS1Q9NZB8 636 aa26.09■■□□□ 1.77
CPNE1-205ENST00000401607 GBF1Q92538 1859 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 GFRA2O00451 464 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 LPXNO60711 386 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 CCR2P41597 374 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 GEMP55040 296 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 MZB1Q8WU39 189 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 NAT9Q9BTE0 207 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 SLC25A51Q9H1U9 297 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 BFARQ9NZS9 450 aa26.08■■□□□ 1.77
CPNE1-205ENST00000401607 FAM159BA6NKW6 160 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 ALDH1A2O94788 518 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CKMP06732 381 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CHN1P15882 459 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 ADRA1AP35348 466 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 NUMBP49757 651 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 LEKR1Q6ZMV7 388 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CYS1Q717R9 158 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 LINC00523Q86TU6 105 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 PGBD5Q8N414 524 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 IPMKQ8NFU5 416 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 NSMCE1Q8WV22 266 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 GCNAQ96QF7 691 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 TBL1YQ9BQ87 522 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 TBC1D30Q9Y2I9 924 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CLASP2O75122 1294 aaKnown RBP26.07■■□□□ 1.76
CPNE1-205ENST00000401607 BRAFP15056 766 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 EPCAMP16422 314 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 KRT15P19012 456 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 EPHA5P54756 1037 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 MAXP61244 160 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CDH17Q12864 832 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CRYMQ14894 314 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 CERCAMQ5T4B2 595 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 TTC39BQ5VTQ0 682 aaPredicted RBP26.07■■□□□ 1.76
CPNE1-205ENST00000401607 RTL10Q7L3V2 364 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 FAM217AQ8IXS0 508 aa26.07■■□□□ 1.76
CPNE1-205ENST00000401607 PPM1NQ8N819 430 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms