RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 ZFYVE19Q96K21 471 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 HSFY1Q96LI6 401 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 TBL1YQ9BQ87 522 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 MTFR1LQ9H019 292 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 NOL11Q9H8H0 719 aaKnown RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 PARVBQ9HBI1 364 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 CAB39Q9Y376 341 aaPredicted RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 MYPNQ86TC9 1320 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 C5orf58C9J3I9 102 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 MPSTP25325 297 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 RAB10P61026 200 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 TNK2Q07912 1038 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 BNIP2Q12982 314 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 PERM1Q5SV97 790 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 BNIPLQ7Z465 357 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 UNC93AQ86WB7 457 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 P2RY11Q96G91 374 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 ACO2Q99798 780 aaKnown RBP11.21□□□□□ -0.61
HPS4-202ENST00000398145 POPDC2Q9HBU9 364 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 PDGFCQ9NRA1 345 aa11.21□□□□□ -0.61
HPS4-202ENST00000398145 BCLAF3A2AJT9 711 aaKnown RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 TRIM24O15164 1050 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 PARNO95453 639 aaKnown RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 CST3P01034 146 aaPredicted RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 CD48P09326 243 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 HNRNPLP14866 589 aaKnown RBP eCLIP11.21□□□□□ -0.62
HPS4-202ENST00000398145 JAK1P23458 1154 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 PRDX6P30041 224 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 GDF10P55107 478 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 POU5F1Q01860 360 aaKnown RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 SHROOM1Q2M3G4 852 aaPredicted RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 TTLL9Q3SXZ7 439 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 ZIK1Q3SY52 487 aaPredicted RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 TTC23LQ6PF05 361 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 HERC6Q8IVU3 1022 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 DAW1Q8N136 415 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 ATP6V0D2Q8N8Y2 350 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 SNX31Q8N9S9 440 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 SETD4Q9NVD3 440 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 TAS2R13Q9NYV9 303 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 ARHGAP28Q9P2N2 729 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 TNFSF13BQ9Y275 285 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 NRP2O60462 931 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 MFN2O95140 757 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 CRTAMO95727 393 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 CCNE2O96020 404 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 ERBB2P04626 1255 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 TFEBP19484 476 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 MSH3P20585 1137 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 HOXD13P35453 343 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 CNTN2Q02246 1040 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 GBE1Q04446 702 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 ARMCX4Q5H9R4 360 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 MTX3Q5HYI7 312 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 FKBP1CQ5VVH2 108 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 ZC3H3Q8IXZ2 948 aaKnown RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 ZNF276Q8N554 614 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 DNAJB14Q8TBM8 379 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 BSNDQ8WZ55 320 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 LENG9Q96B70 501 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 APOL4Q9BPW4 351 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 EBF4Q9BQW3 602 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 DPY30Q9C005 99 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 C6orf62Q9GZU0 229 aaPredicted RBP11.21□□□□□ -0.62
HPS4-202ENST00000398145 CDT1Q9H211 546 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 CAB39LQ9H9S4 337 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 PPM1HQ9ULR3 514 aa11.21□□□□□ -0.62
HPS4-202ENST00000398145 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 NFKB1P19838 968 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
HPS4-202ENST00000398145 KLRC2P26717 231 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 LHX1P48742 406 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 RAB27AP51159 221 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 DGCR6Q14129 220 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 TMEM26Q6ZUK4 368 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 OR8H2Q8N162 312 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 NAT8LQ8N9F0 302 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 METTL6Q8TCB7 284 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 ROGDIQ9GZN7 287 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 ALG9Q9H6U8 611 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 MYH2Q9UKX2 1941 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 CAMTA1Q9Y6Y1 1673 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 PNMA8CA0A1B0GUJ8 204 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 TIPRLO75663 272 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 CTSHP09668 335 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 SLC2A4P14672 509 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 ADSLP30566 484 aaPredicted RBP11.2□□□□□ -0.62
HPS4-202ENST00000398145 MTTPP55157 894 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 PPIL2Q13356 520 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 PPM1JQ5JR12 505 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 ARMC4Q5T2S8 1044 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 BBS7Q8IWZ6 715 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms