RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 AHI1Q8N157 1196 aa26.05■■□□□ 1.76
U2AF1-203ENST00000398137 RNF10Q8N5U6 811 aaKnown RBP26.05■■□□□ 1.76
U2AF1-203ENST00000398137 KCTD6Q8NC69 237 aa26.05■■□□□ 1.76
U2AF1-203ENST00000398137 WFIKKN2Q8TEU8 576 aa26.05■■□□□ 1.76
U2AF1-203ENST00000398137 CALN1Q9BXU9 219 aa26.05■■□□□ 1.76
U2AF1-203ENST00000398137 CATSPERBQ9H7T0 1116 aa26.05■■□□□ 1.76
U2AF1-203ENST00000398137 TBC1D30Q9Y2I9 924 aa26.05■■□□□ 1.76
U2AF1-203ENST00000398137 LRRD1A4D1F6 860 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 FGF10O15520 208 aaPredicted RBP26.04■■□□□ 1.76
U2AF1-203ENST00000398137 FTCDO95954 541 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 MZF1P28698 734 aaPredicted RBP26.04■■□□□ 1.76
U2AF1-203ENST00000398137 PI4KAP42356 2102 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 MAPKAPK2P49137 400 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 MMRN1Q13201 1228 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 PITRM1Q5JRX3 1037 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 C6orf118Q5T5N4 469 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 RNF219Q5W0B1 726 aaPredicted RBP26.04■■□□□ 1.76
U2AF1-203ENST00000398137 SORCS1Q8WY21 1168 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 RAPGEF5Q92565 580 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 TSC1Q92574 1164 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 PIGKQ92643 395 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 CSPG4P5Q96PW8 444 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 EDEM2Q9BV94 578 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 CIPCQ9C0C6 399 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 NDFIP2Q9NV92 336 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 DNAI1Q9UI46 699 aa26.04■■□□□ 1.76
U2AF1-203ENST00000398137 INTS6Q9UL03 887 aaKnown RBP26.04■■□□□ 1.76
U2AF1-203ENST00000398137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.04■■□□□ 1.76
U2AF1-203ENST00000398137 CNOT1A5YKK6 2376 aaKnown RBP26.03■■□□□ 1.76
U2AF1-203ENST00000398137 OXCT1P55809 520 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 IRX4P78413 519 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 DPYSQ14117 519 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 DPYSL3Q14195 570 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 PLEKHG6Q3KR16 790 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 PEAR1Q5VY43 1037 aaPredicted RBP26.03■■□□□ 1.76
U2AF1-203ENST00000398137 SDE2Q6IQ49 451 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 KIAA0907Q7Z7F0 614 aaPredicted RBP26.03■■□□□ 1.76
U2AF1-203ENST00000398137 SETD3Q86TU7 594 aaPredicted RBP26.03■■□□□ 1.76
U2AF1-203ENST00000398137 ADIPOR2Q86V24 386 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 APCDD1Q8J025 514 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 SYCE1Q8N0S2 351 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 DEFB119Q8N690 84 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 FAM71BQ8TC56 605 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 KRT35Q92764 455 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 MUC3BQ9H195 1237 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 ELOVL2Q9NXB9 296 aa26.03■■□□□ 1.76
U2AF1-203ENST00000398137 CDX4O14627 284 aaPredicted RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 MAP3K13O43283 966 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 ZSCAN12O43309 604 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 ADRB1P08588 477 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 ERCC2P18074 760 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 HCAR3P49019 387 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 BYSLQ13895 437 aaKnown RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 ZNF234Q14588 700 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 PDK2Q15119 407 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 SPDYCQ5MJ68 293 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 MBLAC2Q68D91 279 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 IL31Q6EBC2 164 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 PEX26Q7Z412 305 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 NT5DC3Q86UY8 548 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 MKRN2Q9H000 416 aaKnown RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 TRMT1Q9NXH9 659 aaKnown RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 DDX56Q9NY93 547 aaKnown RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 RCOR3Q9P2K3 495 aaPredicted RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 VPS28Q9UK41 221 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 PILRBQ9UKJ0 227 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 MFHAS1Q9Y4C4 1052 aa26.02■■□□□ 1.76
U2AF1-203ENST00000398137 ATXN2Q99700 1313 aaKnown RBP26.02■■□□□ 1.76
U2AF1-203ENST00000398137 WASH4PA8MWX3 477 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 KHNYNO15037 678 aaKnown RBP26.01■■□□□ 1.75
U2AF1-203ENST00000398137 AMPD1P23109 780 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 ITPKAP23677 461 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 KDELR1P24390 212 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 PRKCHP24723 683 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 CTNNA1P35221 906 aaKnown RBP26.01■■□□□ 1.75
U2AF1-203ENST00000398137 EIF4HQ15056 248 aaKnown RBP26.01■■□□□ 1.75
U2AF1-203ENST00000398137 SLC41A1Q8IVJ1 513 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 MAP7D3Q8IWC1 876 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 REXO1L1PQ8IX06 675 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 OR7D4Q8NG98 312 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 ALG14Q96F25 216 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 ZNF670Q9BS34 389 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 RETREG1Q9H6L5 497 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 AMFRQ9UKV5 643 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 CYP8B1Q9UNU6 501 aa26.01■■□□□ 1.75
U2AF1-203ENST00000398137 ADAMTS9Q9P2N4 1935 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 A0A0D9SEW6 157 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 ILVBLA1L0T0 632 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 C4orf47A7E2U8 309 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 POLR2EP19388 210 aaKnown RBP26■■□□□ 1.75
U2AF1-203ENST00000398137 IL4RP24394 825 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 CTNNA2P26232 953 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 GNA12Q03113 381 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 SLC12A1Q13621 1099 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 ODF2Q5BJF6 829 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 SYT12Q8IV01 421 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 CYB5D2Q8WUJ1 264 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 RNF25Q96BH1 459 aaPredicted RBP26■■□□□ 1.75
U2AF1-203ENST00000398137 ALS2CR12Q96Q35 445 aa26■■□□□ 1.75
U2AF1-203ENST00000398137 FEM1AQ9BSK4 669 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms