RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 LCP1P13796 627 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 PGAM1P18669 254 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 ABCG1P45844 678 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 NR2C2P49116 596 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 TNFAIP2Q03169 654 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 PLPPR4Q7Z2D5 763 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 EXOC8Q8IYI6 725 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 ZNF781Q8N8C0 355 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 DDHD1Q8NEL9 900 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 SGF29Q96ES7 293 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 KIF12Q96FN5 646 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 DHRS1Q96LJ7 313 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 RANBP9Q96S59 729 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 CXCL16Q9H2A7 254 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 COG4Q9H9E3 785 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 TRPC7Q9HCX4 862 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 TXNRD2Q9NNW7 524 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 MORF4L1Q9UBU8 362 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 KIAA1257Q9ULG3 409 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 NME7Q9Y5B8 376 aa16.27■□□□□ 0.19
CHMP1A-201ENST00000397901 PPEF2O14830 753 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 FBXO21O94952 628 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SLC25A27O95847 323 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 ARF4P18085 180 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 S100A1P23297 94 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 PSMB4P28070 264 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 AMHR2Q16671 573 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 ZNF829Q3KNS6 432 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SLC9B1Q4ZJI4 515 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 PKDCCQ504Y2 493 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 CYS1Q717R9 158 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 FBXO16Q8IX29 292 aaPredicted RBP16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 ANKRD13AQ8IZ07 590 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 PLD6Q8N2A8 252 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SLC35F5Q8WV83 523 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 TMIGD2Q96BF3 282 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 PPP1R36Q96LQ0 422 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 CGREF1Q99674 301 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 GPATCH1Q9BRR8 931 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 PRDM16Q9HAZ2 1276 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 ACSS2Q9NR19 701 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SNX15Q9NRS6 342 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SLC38A7Q9NVC3 462 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 GOLGA8TH3BQL2 631 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 RNF103O00237 685 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 MFSD11O43934 449 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 BAIAP3O94812 1187 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 VTNP04004 478 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 NFKBIAP25963 317 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 SOWAHAQ2M3V2 549 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 NIPAL1Q6NVV3 410 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 NAPRTQ6XQN6 538 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 FAM131BQ86XD5 332 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 RNF181Q9P0P0 153 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 RBPJLQ9UBG7 517 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 ARHGAP26Q9UNA1 814 aa16.26■□□□□ 0.19
CHMP1A-201ENST00000397901 HSPA4LO95757 839 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 FUCA1P04066 466 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 PSMC3P17980 439 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 MX2P20592 715 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 HARS2P49590 506 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 Q3C1V9 767 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 ZFP1Q6P2D0 407 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 MAPK15Q8TD08 544 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 MOCOSQ96EN8 888 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 PAIP1Q9H074 479 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 DPEP3Q9H4B8 488 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 FAM96AQ9H5X1 160 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 RNF19AQ9NV58 838 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 AKT3Q9Y243 479 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 GOLGA8QA0A0J9YX86 632 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 GOLGA8OA6NCC3 632 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 GOLGA8NF8WBI6 632 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 XPOTO43592 962 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 DGKIO75912 1065 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 MYL4P12829 197 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 MLNP12872 115 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 CDH3P22223 829 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 ADORA2BP29275 332 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 SERPINB5P36952 375 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 CDKL1Q00532 357 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 KLF10Q13118 480 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 CENPSQ8N2Z9 138 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 DCLK2Q8N568 766 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 CCNYQ8ND76 341 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 P2RY11Q96G91 374 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 TMPRSS4Q9NRS4 437 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 VPS45Q9NRW7 570 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 UTP6Q9NYH9 597 aaKnown RBP16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 RIMS3Q9UJD0 308 aa16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 MAGED2Q9UNF1 606 aaPredicted RBP16.25■□□□□ 0.19
CHMP1A-201ENST00000397901 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 SYNJ2BP-COX16A0A087WUM0 186 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 AIM2O14862 343 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 C22orf31O95567 290 aa16.24■□□□□ 0.19
CHMP1A-201ENST00000397901 OXSR1O95747 527 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms