RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 KYNUQ16719 465 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 P3H1Q32P28 736 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 FAM182AQ5T1J6 154 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 IZUMO3Q5VZ72 239 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 ANKRD54Q6NXT1 300 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 GPR149Q86SP6 731 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 DEPDC1BQ8WUY9 529 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 CKAP2Q8WWK9 683 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 P2RY11Q96G91 374 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 RETREG1Q9H6L5 497 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 NOL6Q9H6R4 1146 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 SLC12A4Q9UP95 1085 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 COLQQ9Y215 455 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 OR1E1P30953 314 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 MAPKAPK2P49137 400 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 SGSHP51688 502 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 CDH4P55283 916 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 ADAM15Q13444 863 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 SYCE2Q6PIF2 218 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 POTEHQ6S545 545 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 PPP1R21Q6ZMI0 780 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 ARHGEF18Q6ZSZ5 1173 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 TDRPQ86YL5 185 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 FAM217AQ8IXS0 508 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 DYDC1Q8WWB3 177 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 PHACTR1Q9C0D0 580 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 TTYH1Q9H313 450 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 SEPT10Q9P0V9 454 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 DOCK6Q96HP0 2047 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 E2F8A0AVK6 867 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 CHUKO15111 745 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 PRAMEF12O95522 483 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 PAPOLAP51003 745 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 SLC18A1P54219 525 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 RASA2Q15283 850 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 TRPM8Q7Z2W7 1104 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 ARID3BQ8IVW6 561 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 BBS7Q8IWZ6 715 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 ATPAF2Q8N5M1 289 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 CCDC110Q8TBZ0 833 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 EURLQ9NYK6 297 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 PAK5Q9P286 719 aa19.73■□□□□ 0.75
PDLIM2-204ENST00000397760 CFAP73A6NFT4 308 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 DNALI1O14645 258 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 CLDN11O75508 207 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 GCATO75600 419 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 ZNF189O75820 626 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 STK10O94804 968 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 FSHRP23945 695 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 GTF2A1P52655 376 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 GRIN2CQ14957 1233 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 TTC39BQ5VTQ0 682 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 ARHGAP36Q6ZRI8 547 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 LRRC49Q8IUZ0 686 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 GRAMD1AQ96CP6 724 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 TMA16Q96EY4 203 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 ELAC2Q9BQ52 826 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 USP15Q9Y4E8 981 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 DENND4CQ5VZ89 1909 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 NOTCH4Q99466 2003 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 PDE4DIPQ5VU43 2346 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 TMEM265A0A087WTH1 108 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 RASA4BC9J798 803 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 KCNK1O00180 336 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 GFRA2O00451 464 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 RASA4O43374 803 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 RAMP2O60895 175 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 SUN1O94901 812 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 CCNCP24863 283 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 MNAT1P51948 309 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 ZNF33AQ06730 810 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 MORF4L2Q15014 288 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 CHST9Q7L1S5 443 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 TAB3Q8N5C8 712 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 RIN3Q8TB24 985 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 ZSCAN18Q8TBC5 510 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 HMCESQ96FZ2 354 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 TSGA13Q96PP4 275 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 CDH22Q9UJ99 828 aa19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 TPX2Q9ULW0 747 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-204ENST00000397760 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 A0A1B0GVM2 712 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 TCAF2A6NFQ2 919 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 ARHGAP42A6NI28 874 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 RNF103O00237 685 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 MTSS1O43312 755 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 MAFKO60675 156 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 TBL1XO60907 577 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 BRAFP15056 766 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 HOXB8P17481 243 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 MAGEA4P43358 317 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 WASHC5Q12768 1159 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 ZNF177Q13360 481 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 POLD3Q15054 466 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 CCDC38Q502W7 563 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 ANKRD20A2Q5SQ80 823 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 ANKRD20A1Q5TYW2 823 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 ANKRD20A3Q5VUR7 823 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 CYB5D1Q6P9G0 228 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 C4orf22Q6V702 233 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms