RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TRIM33Q9UPN9 1127 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PTPN22Q9Y2R2 807 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 NDST3O95803 873 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CDC25CP30307 473 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CDH4P55283 916 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CYP4A22Q5TCH4 519 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 KCTD16Q68DU8 428 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 GPATCH11Q8N954 259 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 JADE3Q92613 823 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 MYLPFQ96A32 169 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CPB2Q96IY4 423 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TGS1Q96RS0 853 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 MAGED2Q9UNF1 606 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ACOT9Q9Y305 439 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 LOC285095A0A1B0GVY8 99 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SNNO75324 88 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SULT1E1P49888 294 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CCNG1P51959 295 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TBX4P57082 545 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SULT2A1Q06520 285 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 NIPAL4Q0D2K0 466 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 IKBKEQ14164 716 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 MDH1BQ5I0G3 518 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TXNRD3NBQ6F5E7 133 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 NLRP8Q86W28 1048 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ENPP3O14638 875 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 MAGEC1O60732 1142 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TRIM13O60858 407 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 IPO13O94829 963 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 HSPA8P11142 646 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PIK3CGP48736 1102 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CLCNKBP51801 687 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 GPR33Q49SQ1 333 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 WASHC2DQ5SRD0 308 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 DCAF4L2Q8NA75 395 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TOP1MTQ969P6 601 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 BATF3Q9NR55 127 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TBC1D14Q9P2M4 693 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PCDHB12Q9Y5F1 795 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 RIF1Q5UIP0 2472 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 MGRN1O60291 552 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ENO3P13929 434 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CALB2P22676 271 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 LEPRP48357 1165 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 EIF4HQ15056 248 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 MAPRE2Q15555 327 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 ATP13A4Q4VNC1 1196 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 FSCBQ5H9T9 825 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 HECTD3Q5T447 861 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 FBXO46Q6PJ61 603 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TRMT1LQ7Z2T5 733 aaKnown RBP5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CRLF3Q8IUI8 442 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 PPP4R1Q8TF05 950 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 RTP3Q9BQQ7 232 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 CDHR5Q9HBB8 845 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 SPTA1P02549 2419 aa5.97□□□□□ -1.45
PTPRD-206ENST00000397617 TRIM49D1C9J1S8 452 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 NPIPB8E9PQR5 432 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 SLC5A3P53794 718 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 GPX6P59796 221 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 NFKB2Q00653 900 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 SMU1Q2TAY7 513 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 UNC5BQ8IZJ1 945 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 HJURPQ8NCD3 748 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 PDLIM5Q96HC4 596 aaKnown RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 FCRL2Q96LA5 508 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 RBBP8Q99708 897 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 HERC2P3Q9BVR0 1158 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 CENPHQ9H3R5 247 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 RNF186Q9NXI6 227 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 MFHAS1Q9Y4C4 1052 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 CNOT1A5YKK6 2376 aaKnown RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 MIA3Q5JRA6 1907 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 A0A1W2PQ45 241 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 A0A1W2PQY0 241 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 TADA2AO75478 443 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 PYGLP06737 847 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 CFHP08603 1231 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 AOC1P19801 751 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 FGFR4P22455 802 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 ALDH7A1P49419 539 aaKnown RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 NDUFV1P49821 464 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 C15orf59Q2T9L4 293 aaPredicted RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 SEZ6Q53EL9 994 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 KLC3Q6P597 504 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 PID1Q7Z2X4 250 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 MRPL57Q9BQC6 102 aaKnown RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 OSBPL10Q9BXB5 764 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 MFSD1Q9H3U5 465 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 ARHGEF3Q9NR81 526 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 DNMT3BQ9UBC3 853 aaKnown RBP5.96□□□□□ -1.45
PTPRD-206ENST00000397617 ANAPC1Q9H1A4 1944 aa5.96□□□□□ -1.45
PTPRD-206ENST00000397617 KRT4P19013 534 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF683Q8IZ20 524 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 CCDC110Q8TBZ0 833 aa5.96□□□□□ -1.46
PTPRD-206ENST00000397617 PAIP2Q9BPZ3 127 aaKnown RBP5.96□□□□□ -1.46
PTPRD-206ENST00000397617 LMAN2LQ9H0V9 348 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms