RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RETSATQ6NUM9 610 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 CCNJLQ8IV13 435 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 CARNMT1Q8N4J0 409 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 RBM15Q96T37 977 aaKnown RBP eCLIP19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 S1PR5Q9H228 398 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 PABPC3Q9H361 631 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 LRRC40Q9H9A6 602 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 ATP13A1Q9HD20 1204 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 RBM22Q9NW64 420 aaKnown RBP eCLIP19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 CLEC1BQ9P126 229 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 ATP8A1Q9Y2Q0 1164 aa19.4■□□□□ 0.7
TSPAN4-204ENST00000397404 E7ESA3 106 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 SPAG6O75602 509 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 AP2A1O95782 977 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 PEX11BO96011 259 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 PMS2P54278 862 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 GEMP55040 296 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 EIF3BP55884 814 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 RBM10P98175 930 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ZBTB17Q13105 803 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 LBRQ14739 615 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ALG1LQ6GMV1 187 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 NAPEPLDQ6IQ20 393 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 CIR1Q86X95 450 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 TP53INP2Q8IXH6 220 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ADGRG2Q8IZP9 1017 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 MICALL1Q8N3F8 863 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 DEPDC1BQ8WUY9 529 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ING5Q8WYH8 240 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ATP2A3Q93084 1043 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 MYEOVQ96EZ4 313 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ZSWIM3Q96MP5 696 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 FEM1AQ9BSK4 669 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 NAT9Q9BTE0 207 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 POLR1EQ9GZS1 481 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 SLC25A51Q9H1U9 297 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 PDFQ9HBH1 243 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 GLOD4Q9HC38 313 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 ZFP14Q9HCL3 533 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 UBA2Q9UBT2 640 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 DOCK6Q96HP0 2047 aa19.39■□□□□ 0.69
TSPAN4-204ENST00000397404 NRG2O14511 850 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 ZBTB24O43167 697 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 METTL18O95568 372 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 FAM153BP0C7A2 387 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 MPP3Q13368 585 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 ZNF235Q14590 738 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 FAM153CQ494X1 144 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 PREPLQ4J6C6 727 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 FAM78AQ5JUQ0 283 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 RNF219Q5W0B1 726 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 MTSS1LQ765P7 747 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 GET4Q7L5D6 327 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 GSPT2Q8IYD1 628 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 AGAP3Q96P47 875 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 PSKH2Q96QS6 385 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 XPO6Q96QU8 1125 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 FUT8Q9BYC5 575 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 TTYH1Q9H313 450 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 DUS2Q9NX74 493 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 CLDND1Q9NY35 253 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 FAM153AQ9UHL3 310 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 VPS28Q9UK41 221 aa19.38■□□□□ 0.69
TSPAN4-204ENST00000397404 TRDMT1O14717 391 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 ALOX15BO15296 676 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 LINC01565O15544 149 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 HOXC11O43248 304 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 GSTA2P09210 222 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 SGSHP51688 502 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 GAD2Q05329 585 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 NSUN2Q08J23 767 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 NR1H3Q13133 447 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 CBX2Q14781 532 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 LRRC8BQ6P9F7 803 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 LRIG3Q6UXM1 1119 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 PRUNE1Q86TP1 453 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 CCDC33Q8N5R6 958 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 MSLNLQ96KJ4 702 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 BBS2Q9BXC9 721 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 SMG9Q9H0W8 520 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 PPCSQ9HAB8 311 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 OR51B4Q9Y5P0 310 aa19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 NYNRINQ9P2P1 1898 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-204ENST00000397404 A0A0D9SEW6 157 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 ABHD2P08910 425 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 PSMB4P28070 264 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 MAPK8P45983 427 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 VASPP50552 380 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 FCHO2Q0JRZ9 810 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 GRIN2CQ14957 1233 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 E2F5Q15329 346 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 KCTD11Q693B1 232 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 ARHGAP36Q6ZRI8 547 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 TPGS1Q6ZTW0 290 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 B4GALNT4Q76KP1 1039 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 OTOP3Q7RTS5 596 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 MFSD6LQ8IWD5 586 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 SMRP1Q8NCR6 262 aa19.36■□□□□ 0.69
TSPAN4-204ENST00000397404 ELSPBP1Q96BH3 223 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms