RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 LIMD1Q9UGP4 676 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 CLEC4EQ9ULY5 219 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 NUP205Q92621 2012 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 TULP3O75386 442 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 HSPA9P38646 679 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 DRG2P55039 364 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 PFKPQ01813 784 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 WASHC5Q12768 1159 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 INO80DQ53TQ3 878 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 B4GALNT4Q76KP1 1039 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 KIAA0907Q7Z7F0 614 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 SUGP1Q8IWZ8 645 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 IFT20Q8IY31 132 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 NAT16Q8N8M0 369 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 TRIM51Q9BSJ1 452 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 FAM129AQ9BZQ8 928 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 SEPT3Q9UH03 358 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 VPS51Q9UID3 782 aa24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 NYNRINQ9P2P1 1898 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-202ENST00000397396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 J3KR12 359 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 ASLP04424 464 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 GJA4P35212 333 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 FDFT1P37268 417 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 ADCY8P40145 1251 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 ZNF235Q14590 738 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 LBRQ14739 615 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 EIF4HQ15056 248 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 E2F5Q15329 346 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 ANKRD20A2Q5SQ80 823 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 ANKRD20A1Q5TYW2 823 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 ANKRD20A3Q5VUR7 823 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 PCGF5Q86SE9 256 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 TEX26Q8N6G2 289 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 MSANTD3Q96H12 275 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 TEKT5Q96M29 485 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 FAM114A2Q9NRY5 505 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 GTSE1Q9NYZ3 720 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 SLC25A13Q9UJS0 675 aa24.02■■□□□ 1.44
TSPAN4-202ENST00000397396 GOLGA6CA6NDK9 693 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 GOLGA6BA6NDN3 693 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 LOC730098B7Z3J9 87 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 SMAPO00193 183 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 CTIFO43310 598 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 ZMPSTE24O75844 475 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 PEX11BO96011 259 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 JCHAINP01591 159 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 GOLGA6DP0CG33 693 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 IL9P15248 144 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 POLR2EP19388 210 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 MMP13P45452 471 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 SLC7A5Q01650 507 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 GUCY2DQ02846 1103 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 GPS1Q13098 491 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 ZBTB17Q13105 803 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 CALCOCO2Q13137 446 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 ERCC6LQ2NKX8 1250 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 FUT11Q495W5 492 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 DUPD1Q68J44 220 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 PID1Q7Z2X4 250 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 APCDD1Q8J025 514 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 ZNF567Q8N184 647 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 SLC44A3Q8N4M1 653 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 CCDC110Q8TBZ0 833 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 LRRN4Q8WUT4 740 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 SEC14L1Q92503 715 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 SNF8Q96H20 258 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 CINPQ9BW66 212 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 C8orf33Q9H7E9 229 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 RBM22Q9NW64 420 aaKnown RBP eCLIP24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 GOLGA6AQ9NYA3 693 aa24.01■■□□□ 1.43
TSPAN4-202ENST00000397396 TIMM44O43615 452 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 ATP5BP06576 529 aaKnown RBP24■■□□□ 1.43
TSPAN4-202ENST00000397396 CISD3P0C7P0 127 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 RPL22P35268 128 aaKnown RBP24■■□□□ 1.43
TSPAN4-202ENST00000397396 TERF1P54274 439 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 ARF5P84085 180 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 CUL1Q13616 776 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 TRIP13Q15645 432 aaPredicted RBP24■■□□□ 1.43
TSPAN4-202ENST00000397396 PARP6Q2NL67 630 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 GAB4Q2WGN9 574 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 ADHFE1Q8IWW8 467 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 TTC17Q96AE7 1141 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 GBA3Q9H227 469 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 WHRNQ9P202 907 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 RSPH14Q9UHP6 348 aa24■■□□□ 1.43
TSPAN4-202ENST00000397396 DMGDHQ9UI17 866 aaKnown RBP24■■□□□ 1.43
TSPAN4-202ENST00000397396 INTS6Q9UL03 887 aaKnown RBP24■■□□□ 1.43
TSPAN4-202ENST00000397396 OTOL1A6NHN0 477 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 SNAP91O60641 907 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 GLULP15104 373 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 ITIH2P19823 946 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 VPS41P49754 854 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 VASPP50552 380 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 MRPS25P82663 173 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 CAV1Q03135 178 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 TFF2Q03403 129 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 PRPSAP1Q14558 356 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 MBLAC2Q68D91 279 aa23.99■■□□□ 1.43
TSPAN4-202ENST00000397396 ASTLQ6HA08 431 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms