RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DUS2Q9NX74 493 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 WNT6Q9Y6F9 365 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 KIF26AQ9ULI4 1882 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 DOCK4Q8N1I0 1966 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 TYW5A2RUC4 315 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 GMNCA6NCL1 334 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 E7EVH7 732 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CHADO15335 359 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 TSPAN3O60637 253 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 GCAP28676 217 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 EPHB2P29323 1055 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 IFNAR2P48551 515 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CCT5P48643 541 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 NR2C2P49116 596 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 SEC24CP53992 1094 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 DARS2Q6PI48 645 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 VITQ6UXI7 678 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 MFSD6LQ8IWD5 586 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 MAML1Q92585 1016 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 ARHGEF2Q92974 986 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CCT8L2Q96SF2 557 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 WDR83Q9BRX9 315 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 PAK5Q9P286 719 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 PPARGC1AQ9UBK2 798 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CTNNAL1Q9UBT7 734 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 GGA2Q9UJY4 613 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 IGLV3-10A0A075B6K4 115 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 FGF10O15520 208 aaPredicted RBP15.24■□□□□ 0.03
CAPN3-207ENST00000397200 PSMC3P17980 439 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 HOXC13P31276 330 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 PDIA2Q13087 525 aaKnown RBP15.24■□□□□ 0.03
CAPN3-207ENST00000397200 HTR4Q13639 388 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 C4orf22Q6V702 233 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
CAPN3-207ENST00000397200 CDKL3Q8IVW4 592 aaPredicted RBP15.24■□□□□ 0.03
CAPN3-207ENST00000397200 ZNF683Q8IZ20 524 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 HJURPQ8NCD3 748 aaPredicted RBP15.24■□□□□ 0.03
CAPN3-207ENST00000397200 MDM1Q8TC05 714 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 DEPDC1BQ8WUY9 529 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 IGSF8Q969P0 613 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 TMA16Q96EY4 203 aaKnown RBP15.24■□□□□ 0.03
CAPN3-207ENST00000397200 SELENOSQ9BQE4 189 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 PLA2G2FQ9BZM2 168 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 ZYG11BQ9C0D3 744 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 LINC00597Q9H2U6 94 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 CATSPERBQ9H7T0 1116 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 THEGQ9P2T0 379 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 NUMBLQ9Y6R0 609 aa15.24■□□□□ 0.03
CAPN3-207ENST00000397200 TCRBV7S3A2A0A539 114 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 DRGXA6NNA5 263 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 ANHXE9PGG2 379 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 H7C0C1 242 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 CYBBP04839 570 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 IL9P15248 144 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 ATP5OP48047 213 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 GAD2Q05329 585 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 FCHO2Q0JRZ9 810 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 NR1H3Q13133 447 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 DPYSQ14117 519 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 SKIDA1Q1XH10 827 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 AAK1Q2M2I8 961 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 C5orf22Q49AR2 442 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 MPPE1Q53F39 396 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 FNBP1LQ5T0N5 605 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 TTC39BQ5VTQ0 682 aaPredicted RBP15.23■□□□□ 0.03
CAPN3-207ENST00000397200 C1orf228Q6PIY5 440 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 TPGS1Q6ZTW0 290 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 SPATS2Q86XZ4 545 aaKnown RBP15.23■□□□□ 0.03
CAPN3-207ENST00000397200 ZBED8Q8IZ13 594 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 CFAP52Q8N1V2 620 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 DDI1Q8WTU0 396 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 MYEOVQ96EZ4 313 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 PRICKLE1Q96MT3 831 aaPredicted RBP15.23■□□□□ 0.03
CAPN3-207ENST00000397200 OLFM3Q96PB7 478 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 QKIQ96PU8 341 aaKnown RBP eCLIP15.23■□□□□ 0.03
CAPN3-207ENST00000397200 FRMD8Q9BZ67 464 aaPredicted RBP15.23■□□□□ 0.03
CAPN3-207ENST00000397200 PPANQ9NQ55 473 aaKnown RBP15.23■□□□□ 0.03
CAPN3-207ENST00000397200 ARHGEF4Q9NR80 690 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 MPP6Q9NZW5 540 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 SLC24A2Q9UI40 661 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 NEU3Q9UQ49 428 aa15.23■□□□□ 0.03
CAPN3-207ENST00000397200 GFRA2O00451 464 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 EBAG9O00559 213 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 RHOQP17081 205 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 ERCC2P18074 760 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 AMPD1P23109 780 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 SGSHP51688 502 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 GPX6P59796 221 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 RPS24P62847 133 aaKnown RBP15.22■□□□□ 0.03
CAPN3-207ENST00000397200 GRM2Q14416 872 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 PDGFRLQ15198 375 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 EML3Q32P44 896 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 MSS51Q4VC12 460 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 SLC45A4Q5BKX6 768 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 NCBP2-AS2Q69YL0 99 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 PPP1R21Q6ZMI0 780 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 SRLQ86TD4 932 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 CCDC13Q8IYE1 715 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms