RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CNDP1Q96KN2 507 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 KCTD15Q96SI1 283 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 TEX13BQ9BXU2 312 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 OSBPL6Q9BZF3 934 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF277Q9NRM2 450 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 SACM1LQ9NTJ5 587 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 C20orf96Q9NUD7 363 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 TBCCD1Q9NVR7 557 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 HESX1Q9UBX0 185 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 IGKV6D-21A0A0A0MT36 114 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 GPR25O00155 361 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 MATN2O00339 956 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 TOMM70O94826 608 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CSPG5O95196 566 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ZBTB11O95625 1053 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PFKMP08237 780 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PTPN1P18031 435 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 DPP6P42658 865 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NUMBP49757 651 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 RPL14P50914 215 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NDST2P52849 883 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 OLIG2Q13516 323 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 USP41Q3LFD5 358 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PDCD4Q53EL6 469 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NCBP2-AS2Q69YL0 99 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 THOC7Q6I9Y2 204 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 FSTL4Q6MZW2 842 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 C16orf87Q6PH81 154 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ERI1Q8IV48 349 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ALDH16A1Q8IZ83 802 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 REPS2Q8NFH8 660 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 GFM2Q969S9 779 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ATP6V1E2Q96A05 226 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 RBBP8Q99708 897 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 HNRNPABQ99729 332 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NPAS2Q99743 824 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PTPRHQ9HD43 1115 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PADI4Q9UM07 663 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CDC14AQ9UNH5 594 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CDYLQ9Y232 598 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 RAP2CQ9Y3L5 183 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 KIAA1217Q5T5P2 1943 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 PAPSS1O43252 624 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 USP12O75317 370 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 C2P06681 752 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 STAG3L1P0CL83 205 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 GOT1P17174 413 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 PROZP22891 400 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 ARL4AP40617 200 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 LIMK2P53671 638 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 HMGCS2P54868 508 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 BACE1P56817 501 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 IFRD2Q12894 506 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 PTK2BQ14289 1009 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 MGAT5BQ3V5L5 792 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 SPANXN3Q5MJ09 141 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 IL23RQ5VWK5 629 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 CENPSQ8N2Z9 138 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 URGCPQ8TCY9 931 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 SCYL1Q96KG9 808 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TSNARE1Q96NA8 513 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 FCRL3Q96P31 734 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 AGAP2Q99490 1192 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 NEURL2Q9BR09 285 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 GPATCH1Q9BRR8 931 aaKnown RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 NDEL1Q9GZM8 345 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TRPV6Q9H1D0 765 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TASP1Q9H6P5 420 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 COQ10BQ9H8M1 238 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 VPS51Q9UID3 782 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 VPS28Q9UK41 221 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 ADAM28Q9UKQ2 775 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 WDR81Q562E7 1941 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 A6NL46 340 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 CBFA2T3O75081 653 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 H2AFYO75367 372 aaKnown RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 FARP2O94887 1054 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 VAPBO95292 243 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF23P17027 643 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TFEBP19484 476 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 ATICP31939 592 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 ICAM3P32942 547 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 GRIA4P48058 902 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 BCAP31P51572 246 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 CTBSQ01459 385 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 ARL13AQ5H913 290 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 EEPD1Q7L9B9 569 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 PYROXD2Q8N2H3 581 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TMEM102Q8N9M5 508 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 OR52K1Q8NGK4 314 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.92
CAPN3-206ENST00000397163 P2RY11Q96G91 374 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TMEM79Q9BSE2 394 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 SLC2A11Q9BYW1 496 aa9.32□□□□□ -0.92
CAPN3-206ENST00000397163 TBC1D23Q9NUY8 699 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms