RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PCDHGB3Q9Y5G1 929 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 E7ENQ6 273 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 G3V2T6 193 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ALAS2P22557 587 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 HSPA14Q0VDF9 509 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SCARF1Q14162 830 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 GCNT7Q6ZNI0 430 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 EMC1Q8N766 993 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 OR7A2PQ8NGA2 310 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 TESCQ96BS2 214 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 NDUFA13Q9P0J0 144 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 WDR27A2RRH5 827 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ARHGEF33A8MVX0 844 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 NAB2Q15742 525 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 PTGISQ16647 500 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 SATL1Q86VE3 508 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 C2orf73Q8N5S3 287 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 TMEM237Q96Q45 408 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 PARPBPQ9NWS1 579 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SGTAO43765 313 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 HBP1O60381 514 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 NPR3P17342 541 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 AP2S1P53680 142 aaPredicted RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 CAV3P56539 151 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 BCL2L1Q07817 233 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CARTPTQ16568 116 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 PPM1LQ5SGD2 360 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 WDR93Q6P2C0 686 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ZCCHC23Q6ZST2 131 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SNX20Q7Z614 316 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 RASAL3Q86YV0 1011 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 LGI2Q8N0V4 545 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 PCDH20Q8N6Y1 951 aaKnown RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 OR56A4Q8NGH8 313 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 KAT5Q92993 513 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 RABGEF1Q9UJ41 708 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 KIAA0391O15091 583 aaKnown RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 RASGRP1O95267 797 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 PRKAR1AP10644 381 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SLC7A2P52569 658 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 TAS2R41P59536 307 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ZNF611Q8N823 705 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SELENOMQ8WWX9 145 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 PPP1R14BQ96C90 147 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 FCRL4Q96PJ5 515 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CNPY3Q9BT09 278 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 GGA3Q9NZ52 723 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 MECP2P51608 486 aaKnown RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 CLCN3P51790 818 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 PIK3R6Q5UE93 754 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 RAET1GQ6H3X3 334 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 SPATA20Q8TB22 786 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 HIF3AQ9Y2N7 669 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 A0A1W2PQ72 361 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 HYKKA2RU49 373 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 IL12AP29459 219 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 TKTL1P51854 596 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SREBF2Q12772 1141 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 BOLA3Q53S33 107 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 UBE2R2Q712K3 238 aaPredicted RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 TDRPQ86YL5 185 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 GPSM1Q86YR5 675 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 C8orf59Q8N0T1 100 aaPredicted RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 NAXEQ8NCW5 288 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CDRT15Q96T59 188 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 GMPPBQ9Y5P6 360 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 A0A096LPK6 155 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 LRATO95237 230 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 THP07101 528 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SERPINF2P08697 491 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ABRQ12979 859 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 IL18Q14116 193 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SCIMPQ6UWF3 145 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ARHGAP36Q6ZRI8 547 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 STARD7Q9NQZ5 370 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 DNMT3LQ9UJW3 386 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 UNC13AQ9UPW8 1703 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CD151P48509 253 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 ACAD10Q6JQN1 1059 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 AMIGO1Q86WK6 493 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CRNNQ9UBG3 495 aaPredicted RBP12.49□□□□□ -0.41
SMU1-201ENST00000397149 ERGIC3Q9Y282 383 aa12.49□□□□□ -0.41
SMU1-201ENST00000397149 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 IST1P53990 364 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 BTG3Q14201 252 aaPredicted RBP12.48□□□□□ -0.41
SMU1-201ENST00000397149 FAM131AQ6UXB0 335 aa12.48□□□□□ -0.41
SMU1-201ENST00000397149 PHF10Q8WUB8 498 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms