RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SERHL2Q9H4I8 314 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PIF1Q9H611 641 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SERHLQ9NQF3 203 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ARHGEF3Q9NR81 526 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TIMM13Q9Y5L4 95 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ZCCHC18P0CG32 403 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PTPN1P18031 435 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 AMPD1P23109 780 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 THOP1P52888 689 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 XRCC4Q13426 336 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 FNDC3BQ53EP0 1204 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 IL27RAQ6UWB1 636 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF670Q9BS34 389 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MAF1Q9H063 256 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 FANCEQ9HB96 536 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 KCNMB3Q9NPA1 279 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ETNK2Q9NVF9 386 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 GEMIN8Q9NWZ8 242 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MYRFQ9Y2G1 1151 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 KPNA4O00629 521 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 NBNO60934 754 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ANXA5P08758 320 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ETS1P14921 441 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ITGA2P17301 1181 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TCHHL1Q5QJ38 904 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 LRRC38Q5VT99 294 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CROCCP3Q8IVE0 287 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 FAM71AQ8IYT1 594 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DEFB106AQ8N104 65 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CD101Q93033 1021 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SEPHS2Q99611 448 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DNAJC18Q9H819 358 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 KCND1Q9NSA2 647 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 LIMD1Q9UGP4 676 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MFHAS1Q9Y4C4 1052 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 BTNL10A8MVZ5 291 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 KCNK1O00180 336 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TYMPP19971 482 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 OASLQ15646 514 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 OTUD3Q5T2D3 398 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SH3BP5LQ7L8J4 393 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ARHGEF19Q8IW93 802 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PEX5LQ8IYB4 626 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF398Q8TD17 642 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PTCD3Q96EY7 689 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CERS2Q96G23 380 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SENP8Q96LD8 212 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SH3GL2Q99962 352 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DMGDHQ9UI17 866 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RPS6KA6Q9UK32 745 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 FAM50BQ9Y247 325 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CLUHO75153 1309 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 LRRC10BA6NIK2 292 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 FTH1P02794 183 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ERBB2P04626 1255 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CCNB1P14635 433 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SPIDRQ14159 915 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TAB1Q15750 504 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SLC39A12Q504Y0 691 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PMF1Q6P1K2 205 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 EPHX4Q8IUS5 362 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SLC9A9Q8IVB4 645 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SUSD6Q92537 303 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RNF145Q96MT1 663 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 SPAG4Q9NPE6 437 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 GPATCH2LQ9NWQ4 482 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 C2CD2Q9Y426 696 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 A0A0B4J269 797 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PDE2AO00408 941 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 DCXO43602 365 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 FAM20BO75063 409 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CSDE1O75534 798 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CTSEP14091 401 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TSHRP16473 764 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CBWD6Q4V339 395 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MFSD7Q6UXD7 560 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF621Q6ZSS3 439 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ARCQ7LC44 396 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 PLPPR4Q7Z2D5 763 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 Q96MT0 163 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HDHD2Q9H0R4 259 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 HMG20AQ9NP66 347 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZMYM5Q9UJ78 669 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 BCLAF3A2AJT9 711 aaKnown RBP5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MYL12BO14950 172 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 RARAP10276 462 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 CCNA2P20248 432 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 TXNDC11Q6PKC3 985 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 POLNQ7Z5Q5 900 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 COLGALT2Q8IYK4 626 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 LGI2Q8N0V4 545 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 S100A13Q99584 98 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ADAM2Q99965 735 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 POMKQ9H5K3 350 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 REEP1Q9H902 201 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ADAM28Q9UKQ2 775 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 VAV3Q9UKW4 847 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF510Q9Y2H8 683 aa5.53□□□□□ -1.52
VPS13C-204ENST00000395898 MON2Q7Z3U7 1717 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms