RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MT-CO1P00395 513 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 PRNPP04156 253 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 PLEKP08567 350 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-205ENST00000395794 RHOQP17081 205 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 RRM1P23921 792 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 CHRNA3P32297 505 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 NUDT1P36639 197 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 MAPKAPK2P49137 400 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 ZNF143P52747 638 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-205ENST00000395794 GEMIN4P57678 1058 aaKnown RBP14.06□□□□□ -0.16
CXCL12-205ENST00000395794 NRG1Q02297 640 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-205ENST00000395794 ASIC2Q16515 512 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 POM121L1PQ3SYA9 428 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 EFHC2Q5JST6 749 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 ACAD10Q6JQN1 1059 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 WDR59Q6PJI9 974 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 LINGO4Q6UY18 593 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 MON1BQ7L1V2 547 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 SLFN11Q7Z7L1 901 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 OR7D4Q8NG98 312 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 CENPIQ92674 756 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-205ENST00000395794 TBC1D31Q96DN5 1066 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 SERAC1Q96JX3 654 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 METRNQ9UJH8 293 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 SARDHQ9UL12 918 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 FNDC3AQ9Y2H6 1198 aaKnown RBP14.06□□□□□ -0.16
CXCL12-205ENST00000395794 PCDHGB2Q9Y5G2 931 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 PCDH15Q96QU1 1955 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 A0A1W2PQC6 194 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 K7ERQ8 282 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 KPNA3O00505 521 aaPredicted RBP14.05□□□□□ -0.16
CXCL12-205ENST00000395794 FLRT2O43155 660 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 RTN2O75298 545 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 PTMSP20962 102 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 CD38P28907 300 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 DRD3P35462 400 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 DNA2P51530 1060 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 HDAC4P56524 1084 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 BNC1Q01954 994 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 CNTN1Q12860 1018 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 ZNF423Q2M1K9 1284 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 INAVAQ3KP66 663 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 SFMBT2Q5VUG0 894 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 IRF2BP2Q7Z5L9 587 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 TMIEQ8NEW7 156 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 OR2A12Q8NGT7 310 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 NTAN1Q96AB6 310 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 PPP1R16AQ96I34 528 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 VCPIP1Q96JH7 1222 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 SLC6A18Q96N87 628 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 CAMK1GQ96NX5 476 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 MCEEQ96PE7 176 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 CNPY3Q9BT09 278 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 CEP44Q9C0F1 390 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 SLCO1B1Q9Y6L6 691 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 GON4LQ3T8J9 2241 aa14.05□□□□□ -0.16
CXCL12-205ENST00000395794 SPTBN2O15020 2390 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 LRRC53A6NM62 1247 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 TMCO5BA8MYB1 307 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 PLK4O00444 970 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 SMAD6O43541 496 aaKnown RBP14.04□□□□□ -0.16
CXCL12-205ENST00000395794 PLRG1O43660 514 aaKnown RBP14.04□□□□□ -0.16
CXCL12-205ENST00000395794 RAMP2O60895 175 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 LRIG2O94898 1065 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 GLDCP23378 1020 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 SERPINH1P50454 418 aaKnown RBP14.04□□□□□ -0.16
CXCL12-205ENST00000395794 CCT8P50990 548 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 METAP1P53582 386 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 AIF1P55008 147 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 KLHL40Q2TBA0 621 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 C22orf39Q6P5X5 142 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 LAYNQ6UX15 382 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 ZNF354CQ86Y25 554 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 MCOLN2Q8IZK6 566 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 PCDH20Q8N6Y1 951 aaKnown RBP14.04□□□□□ -0.16
CXCL12-205ENST00000395794 CCDC185Q8N715 623 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 RHBDD1Q8TEB9 315 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 BAP1Q92560 729 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 CDC6Q99741 560 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 ORAI3Q9BRQ5 295 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 MAGEH1Q9H213 219 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 TNKS2Q9H2K2 1166 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 PREBQ9HCU5 417 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 GDF3Q9NR23 364 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 PARVAQ9NVD7 372 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 TMEM248Q9NWD8 314 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 ZNF212Q9UDV6 495 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 IL36AQ9UHA7 158 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 DNAI1Q9UI46 699 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 DMTF1Q9Y222 760 aa14.04□□□□□ -0.16
CXCL12-205ENST00000395794 APOBEC2Q9Y235 224 aaKnown RBP14.04□□□□□ -0.16
CXCL12-205ENST00000395794 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 CXorf51AA0A1B0GTR3 108 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 SYCE3A1L190 88 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 GOLGA6L19H0YKK7 550 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 KCNK3O14649 394 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 CCP110O43303 1012 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms