RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 RAB27AP51159 221 aa17.39■□□□□ 0.38
SGCB-201ENST00000381431 DEPDC1Q5TB30 811 aa17.39■□□□□ 0.38
SGCB-201ENST00000381431 LCLAT1Q6UWP7 414 aa17.39■□□□□ 0.38
SGCB-201ENST00000381431 LIMD1Q9UGP4 676 aa17.39■□□□□ 0.38
SGCB-201ENST00000381431 URB1O60287 2271 aaKnown RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 MGAT4DA6NG13 374 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 FANCGO15287 622 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 HNRNPRO43390 633 aaKnown RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 WDR47O94967 919 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 URODP06132 367 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 PPIL2Q13356 520 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 FRG1Q14331 258 aaKnown RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 ZDHHC24Q6UX98 284 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 APLFQ8IW19 511 aaPredicted RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 CYP4X1Q8N118 509 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 PTGR2Q8N8N7 351 aaPredicted RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 ACMSDQ8TDX5 336 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 ZFP42Q96MM3 310 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 HGH1Q9BTY7 390 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 MPP6Q9NZW5 540 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 LINC00854A0A1B0GVQ3 168 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 ADRM1Q16186 407 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 HIST2H2ACQ16777 129 aaPredicted RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 HIST2H2AA3Q6FI13 130 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 ULK2Q8IYT8 1036 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 TRPC4APQ8TEL6 797 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 SEPT8Q92599 483 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 SEMA3CQ99985 751 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.39■□□□□ 0.37
SGCB-201ENST00000381431 UBA2Q9UBT2 640 aaPredicted RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 EGFRP00533 1210 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 ATP5F1P24539 256 aaPredicted RBP17.39■□□□□ 0.37
SGCB-201ENST00000381431 GRM5P41594 1212 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 BRCC3P46736 316 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 RCN3Q96D15 328 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 GRIP2Q9C0E4 1043 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
SGCB-201ENST00000381431 MYPNQ86TC9 1320 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 SEC22BO75396 215 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 KRT6AP02538 564 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 KRT6BP04259 564 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 BPGMP07738 259 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 ADRA1BP35368 520 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 ARL2P36404 184 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 KRT6CP48668 564 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 RAD23AP54725 363 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 NRLP54845 237 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 ELAVL2Q12926 359 aaKnown RBP17.38■□□□□ 0.37
SGCB-201ENST00000381431 ZFP1Q6P2D0 407 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 DDHD1Q8NEL9 900 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 CLPTM1LQ96KA5 538 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 RMND5AQ9H871 391 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 CLCA2Q9UQC9 943 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 PTGES3LE9PB15 166 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 RGS5O15539 181 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 KPNA6O60684 536 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 LTA4HP09960 611 aaKnown RBP17.38■□□□□ 0.37
SGCB-201ENST00000381431 GRIA3P42263 894 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 IL5RAQ01344 420 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 TRIM16LQ309B1 348 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 RNASEH2BQ5TBB1 312 aaKnown RBP17.38■□□□□ 0.37
SGCB-201ENST00000381431 MILR1Q7Z6M3 343 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 CLVS1Q8IUQ0 354 aaPredicted RBP17.38■□□□□ 0.37
SGCB-201ENST00000381431 MYLPFQ96A32 169 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 SH3BP4Q9P0V3 963 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 KANSL3Q9P2N6 904 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 EFR3BQ9Y2G0 817 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 CCDC154A6NI56 674 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 ZNF839A8K0R7 811 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 TNFAIP8O95379 198 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 ZNF7P17097 686 aaPredicted RBP17.38■□□□□ 0.37
SGCB-201ENST00000381431 SLC20A2Q08357 652 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 PPM1JQ5JR12 505 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 NUDT18Q6ZVK8 323 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 MPP4Q96JB8 637 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 MORF4L1Q9UBU8 362 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 SEPT3Q9UH03 358 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 ST3GAL5Q9UNP4 418 aa17.38■□□□□ 0.37
SGCB-201ENST00000381431 MYL4P12829 197 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 CCT8P50990 548 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 BNIP1Q12981 228 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 ZNF284Q2VY69 593 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 ANKS3Q6ZW76 656 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 OR56A4Q8NGH8 313 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 KLHL5Q96PQ7 755 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 PLLPQ9Y342 182 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 COQ4Q9Y3A0 265 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 PLIN4Q96Q06 1357 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 SMIM28A0A1B0GU29 152 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 ANPEPP15144 967 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 DDX5P17844 614 aaKnown RBP17.37■□□□□ 0.37
SGCB-201ENST00000381431 MSLNQ13421 630 aaPredicted RBP17.37■□□□□ 0.37
SGCB-201ENST00000381431 STARD3Q14849 445 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 DNAJB14Q8TBM8 379 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 BDH2Q9BUT1 245 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 BBS2Q9BXC9 721 aa17.37■□□□□ 0.37
SGCB-201ENST00000381431 ATP11BQ9Y2G3 1177 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms