RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 HMGXB4Q9UGU5 601 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 FBP2O00757 339 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 H6PDO95479 791 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 STAG3L1P0CL83 205 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ZFXP17010 805 aaPredicted RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 NUP107P57740 925 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 GNA12Q03113 381 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 CD300CQ08708 224 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 CA9Q16790 459 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 MFSD4BQ5TF39 518 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 HEATR6Q6AI08 1181 aaKnown RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 ARMCX2Q7L311 632 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 OFCC1Q8IZS5 231 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 SHCBP1Q8NEM2 672 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ADCY4Q8NFM4 1077 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 PRMT7Q9NVM4 692 aaPredicted RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 FAIMQ9NVQ4 179 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 GTSE1Q9NYZ3 720 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 RGSL1A5PLK6 1076 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ZNF839A8K0R7 811 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 TRDMT1O14717 391 aaKnown RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 SPTLC1O15269 473 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 NOL3O60936 208 aaKnown RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 GRK2P25098 689 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 HALP42357 657 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 PRPSAP1Q14558 356 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 SLC10A6Q3KNW5 377 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 MGAT5BQ3V5L5 792 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ZNF484Q5JVG2 852 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 JADE1Q6IE81 842 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 GK5Q6ZS86 529 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ELOVL4Q9GZR5 314 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 PDZD7Q9H5P4 517 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ZNF696Q9H7X3 374 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 RNF181Q9P0P0 153 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 RNF11Q9Y3C5 154 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 A0A087WZ62 844 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 TMEM233B4DJY2 109 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 PIGNO95427 931 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 LGALS2P05162 132 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 UGT1A6P19224 532 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 PRKCHP24723 683 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ATXN1P54253 815 aaKnown RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 OLFML1Q6UWY5 402 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 XYLT1Q86Y38 959 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 FNIP1Q8TF40 1166 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 GFM2Q969S9 779 aaKnown RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 SLC39A3Q9BRY0 314 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 KATNBL1Q9H079 304 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 ILKAPQ9H0C8 392 aaPredicted RBP14.09□□□□□ -0.15
SDC1-202ENST00000381150 CDH19Q9H159 772 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 PLAC1Q9HBJ0 212 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 CCDC167Q9P0B6 97 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 SFMBT1Q9UHJ3 866 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 RIMS3Q9UJD0 308 aa14.09□□□□□ -0.15
SDC1-202ENST00000381150 CROCCQ5TZA2 2017 aa14.08□□□□□ -0.15
SDC1-202ENST00000381150 SH3PXD2BA1X283 911 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 K7EPI3 171 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 CILPO75339 1184 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 VAPBO95292 243 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 GNAO1P09471 354 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 STILQ15468 1287 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 DCAF6Q58WW2 860 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 ZNF667Q5HYK9 610 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 PERM1Q5SV97 790 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 LDLRAD1Q5T700 205 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 SEL1L3Q68CR1 1132 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 PQLC3Q8N755 202 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 RNF157Q96PX1 679 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 OMDQ99983 421 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 SLC39A10Q9ULF5 831 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 ASB14A6NK59 587 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 KCNU1A8MYU2 1149 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 TK2O00142 265 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 CYP2C8P10632 490 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 UGT1A1P22309 533 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 UGT1A4P22310 534 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 UGT1A3P35503 534 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 UGT1A5P35504 534 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 CDK9P50750 372 aaKnown RBP14.08□□□□□ -0.16
SDC1-202ENST00000381150 CARTPTQ16568 116 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 STRA8Q7Z7C7 330 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 IFNEQ86WN2 208 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 TTC16Q8NEE8 873 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 ZNF669Q96BR6 464 aaPredicted RBP14.08□□□□□ -0.16
SDC1-202ENST00000381150 SIGLEC10Q96LC7 697 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 TSNARE1Q96NA8 513 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 LGMNQ99538 433 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 C16orf70Q9BSU1 422 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 EFCAB1Q9HAE3 211 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 EFR3BQ9Y2G0 817 aa14.08□□□□□ -0.16
SDC1-202ENST00000381150 A0A096LPK6 155 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms