RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 C12orf65Q9H3J6 166 aaKnown RBP20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 GKN1Q9NS71 199 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 FGFR1OP2Q9NVK5 253 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 SLC17A7Q9P2U7 560 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 PRDM4Q9UKN5 801 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 LAMA2P24043 3122 aaKnown RBP20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 MAGEB16A2A368 324 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 C2orf78A6NCI8 922 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 ZBBXA8MT70 800 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 TM9SF1O15321 606 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 RAMP2O60895 175 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 ERVK-10P10266 1014 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 TAC1P20366 129 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 PPM1AP35813 382 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 SERPINB9P50453 376 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 GEMP55040 296 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 SLC10A7Q0GE19 358 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 C5orf22Q49AR2 442 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 ANKRD20A4Q4UJ75 823 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 MROH9Q5TGP6 573 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 DENND1CQ8IV53 801 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 TCEAL8Q8IYN2 117 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 CACNA2D3Q8IZS8 1091 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 FATE1Q969F0 183 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 PABPC5Q96DU9 382 aaKnown RBP20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 MTBPQ96DY7 904 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 KLHL5Q96PQ7 755 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 ELAC2Q9BQ52 826 aaKnown RBP20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 TMEM106CQ9BVX2 250 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 NSRP1Q9H0G5 558 aaKnown RBP20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 SP110Q9HB58 689 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 CHRAC1Q9NRG0 131 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 PCDHB12Q9Y5F1 795 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 FAM169AQ9Y6X4 670 aa20.2■□□□□ 0.83
PDLIM5-205ENST00000380180 ZCWPW2A0A1B0GU75 182 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 TEX28O15482 410 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 LILRB3O75022 631 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 RFPL1O75677 317 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 USP1O94782 785 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 KLKB1P03952 638 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 ADRA1DP25100 572 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 MAPKAPK2P49137 400 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 SLC11A2P49281 568 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 MGAT5Q09328 741 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 SF3A3Q12874 501 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 SMAD1Q15797 465 aaKnown RBP20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 SEPT7Q16181 437 aaKnown RBP20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 PARP15Q460N3 678 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 MARC1Q5VT66 337 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 SPATS2Q86XZ4 545 aaKnown RBP20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 MFSD3Q96ES6 412 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 APOPT1Q96IL0 206 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 PPP1R2P1Q96PQ5 205 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 NT5MQ9NPB1 228 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 GGA2Q9UJY4 613 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 INSL5Q9Y5Q6 135 aa20.2■□□□□ 0.82
PDLIM5-205ENST00000380180 FAM237BA0A1B0GVD1 139 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 PMPCBO75439 489 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 STC2O76061 302 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 FGF18O76093 207 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 SPATA31D3P0C874 917 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 ADRA1AP35348 466 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 NEK3P51956 506 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 EPHB3P54753 998 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 YBEYP58557 167 aaPredicted RBP20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 SERINC3Q13530 473 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 SPATA31D4Q6ZUB0 917 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 PLD4Q96BZ4 506 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 FICDQ9BVA6 458 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 ZFATQ9P243 1243 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 SOX13Q9UN79 622 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 PSAT1Q9Y617 370 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 OAS1P00973 400 aaKnown RBP20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 ACVRL1P37023 503 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 PDK4Q16654 411 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 DENND5AQ6IQ26 1287 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 PACS1Q6VY07 963 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 RASSF3Q86WH2 238 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 CABS1Q96KC9 395 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 SLC25A51Q9H1U9 297 aa20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 ZFP37Q9Y6Q3 630 aaPredicted RBP20.19■□□□□ 0.82
PDLIM5-205ENST00000380180 ALPK3Q96L96 1907 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 CNTFP26441 200 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 CORO1AP31146 461 aaKnown RBP20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 CA8P35219 290 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 PPP3CCP48454 512 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 MAXP61244 160 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 IL10RBQ08334 325 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 NAB1Q13506 487 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 ZKSCAN8Q15776 578 aaPredicted RBP20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 ZNF449Q6P9G9 518 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 C6orf89Q6UWU4 347 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 MICALCLQ6ZW33 695 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 TMEM150AQ86TG1 271 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 MRGPRX2Q96LB1 330 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 KLF16Q9BXK1 252 aaPredicted RBP20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 ENTPD7Q9NQZ7 604 aa20.18■□□□□ 0.82
PDLIM5-205ENST00000380180 COPEO14579 308 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms