RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 JPH3Q8WXH2 748 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 HDAC2Q92769 488 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 CD101Q93033 1021 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 CFAP36Q96G28 342 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 HEXIM2Q96MH2 286 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ZNF560Q96MR9 790 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TMEM246Q9BRR3 403 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ZNF577Q9BSK1 485 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ANKRD60Q9BZ19 345 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 HMG20AQ9NP66 347 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TIGARQ9NQ88 270 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ADPRHL2Q9NX46 363 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 NXF1Q9UBU9 619 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 BOLA1Q9Y3E2 137 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 AFG3L2Q9Y4W6 797 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TRIM64A6NGJ6 449 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 FAM86B1E9PN63 330 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 KLF11O14901 512 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 MED24O75448 989 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 RFPL2O75678 378 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PIAS1O75925 651 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 MFN2O95140 757 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 FAM86B2P0C5J1 330 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 MATN1P21941 496 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PSMC2P35998 433 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 AP2S1P53680 142 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PRKAA2P54646 552 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 RAD23AP54725 363 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PRAMEP78395 509 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 RHAGQ02094 409 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 CDC20Q12834 499 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 IKBKEQ14164 716 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SLC51AQ86UW1 340 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TPH2Q8IWU9 490 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TP53I13Q8NBR0 393 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 DHX38Q92620 1227 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SH3KBP1Q96B97 665 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 UROC1Q96N76 676 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TMEM121Q9BTD3 319 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 WDR12Q9GZL7 423 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 COQ10BQ9H8M1 238 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 VPS37BQ9H9H4 285 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 POLR1BQ9H9Y6 1135 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SIX2Q9NPC8 291 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ZNF229Q9UJW7 825 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PTBP2Q9UKA9 531 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 MAFFQ9ULX9 164 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 A0A0B4J269 797 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 C12orf71A8MTZ7 269 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 WDR64B1ANS9 1081 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 H0YJX3 145 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 NFKBIEO00221 500 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 VWA5AO00534 786 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 NDUFA2O43678 99 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 USP12O75317 370 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 EPN2O95208 641 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ACAT1P24752 427 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ICAM3P32942 547 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 PTPN5P54829 565 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TUBB3Q13509 450 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TAF5Q15542 800 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ZFP1Q6P2D0 407 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SYDE1Q6ZW31 735 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 HAUS6Q7Z4H7 955 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ARMC8Q8IUR7 673 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 ZCCHC9Q8N567 271 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 TFB1MQ8WVM0 346 aaKnown RBP7.61□□□□□ -1.19
CDKL5-201ENST00000379989 NXPE3Q969Y0 559 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 STRA6Q9BX79 667 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 DCAF16Q9NXF7 216 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 DNMT3LQ9UJW3 386 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 VPS4AQ9UN37 437 aa7.61□□□□□ -1.19
CDKL5-201ENST00000379989 SBF1O95248 1867 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 A0A1W2PQ72 361 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 POTEB3A0JP26 581 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 EVPLLA8MZ36 301 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 LPXNO60711 386 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 KCNK2O95069 426 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 HADHBP55084 474 aaKnown RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 BST1Q10588 318 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 MAPK11Q15759 364 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ECM1Q16610 540 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 EFHC2Q5JST6 749 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 SDE2Q6IQ49 451 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 RINT1Q6NUQ1 792 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 POTEBQ6S5H4 581 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 FRMD7Q6ZUT3 714 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ZNF786Q8N393 782 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ZSWIM2Q8NEG5 633 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 CLEC4DQ8WXI8 215 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 DACT3Q96B18 629 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-201ENST00000379989 CEP170P1Q96L14 293 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 DEPDC7Q96QD5 511 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 KCNK16Q96T55 309 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 C17orf62Q9BQA9 187 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 SYT11Q9BT88 431 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 MCMBPQ9BTE3 642 aa7.6□□□□□ -1.19
CDKL5-201ENST00000379989 ZSCAN5AQ9BUG6 496 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms