RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MAFKO60675 156 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 PARNO95453 639 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ALDH2P05091 517 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 BPGMP07738 259 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 MAGEA12P43365 314 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 SERPINB8P50452 374 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TUBP50607 506 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 NDST2P52849 883 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ARFIP2P53365 341 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TBX4P57082 545 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 CRADDP78560 199 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 PDE1BQ01064 536 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 RIPK1Q13546 671 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TRIP4Q15650 581 aaPredicted RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 PDPK2PQ6A1A2 396 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ASRGL1Q7L266 308 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ARMC2Q8NEN0 867 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 INPP5DQ92835 1189 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 PTPRN2Q92932 1015 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ERP27Q96DN0 273 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 CELF6Q96J87 481 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 RAB3IPQ96QF0 476 aaPredicted RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 RBBP8Q99708 897 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TBL1YQ9BQ87 522 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 KIFC1Q9BW19 673 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 SLC13A1Q9BZW2 595 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 C12orf65Q9H3J6 166 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 MRM3Q9HC36 420 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ENTPD7Q9NQZ7 604 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ARHGEF3Q9NR81 526 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TLR8Q9NR97 1041 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 DNAJB4Q9UDY4 337 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 ZFP69BQ9UJL9 534 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 HS3ST4Q9Y661 456 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TANC1Q9C0D5 1861 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 ZCWPW2A0A1B0GU75 182 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 TPP1O14773 563 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 MSI1O43347 362 aaKnown RBP10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 DNAJC6O75061 913 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 NEBLO76041 1014 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 ALDOAP04075 364 aaKnown RBP10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 MPOP05164 745 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 RHOQP17081 205 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 YWHAQP27348 245 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 PBX2P40425 430 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 POLD2P49005 469 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 KPNA1P52294 538 aaPredicted RBP10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 LIMK2P53671 638 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 RPL10AP62906 217 aaKnown RBP10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 ELF3P78545 371 aaPredicted RBP10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 TMPRSS15P98073 1019 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 GPR17Q13304 367 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 SNCBQ16143 134 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 CCDC153Q494R4 210 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 PCID2Q5JVF3 399 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM171A1Q5VUB5 890 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM91A1Q658Y4 838 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 POTEHQ6S545 545 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 LCA5Q86VQ0 697 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 KCNMB4Q86W47 210 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 NPAS4Q8IUM7 802 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM126BQ8IXS8 530 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 UMODL1-AS1Q8N2C9 162 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 CNTD1Q8N815 330 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 CASD1Q96PB1 797 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 CDK5RAP1Q96SZ6 601 aaKnown RBP10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 ZYG11BQ9C0D3 744 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 SLC39A8Q9C0K1 460 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM96AQ9H5X1 160 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 RETREG1Q9H6L5 497 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 KCNK4Q9NYG8 393 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 GGT7Q9UJ14 662 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 MYO9BQ13459 2157 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 NUP205Q92621 2012 aa10.66□□□□□ -0.7
POLR2J3-201ENST00000379340 IGLV3-10A0A075B6K4 115 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 GRXCR1A8MXD5 290 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 NBNO60934 754 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 SNNO75324 88 aaPredicted RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ERVK-10P10266 1014 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 CPB1P15086 417 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 DNAJB1P25685 340 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 TYK2P29597 1187 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 OCRLQ01968 901 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 RING1Q06587 406 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 TNK2Q07912 1038 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 MPP3Q13368 585 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 PDE1CQ14123 709 aaPredicted RBP10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ADGRE1Q14246 886 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 DDR2Q16832 855 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 UGP2Q16851 508 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ARTNQ5T4W7 220 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 TEDDM1Q5T9Z0 273 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 FUT10Q6P4F1 479 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 ANKS3Q6ZW76 656 aa10.65□□□□□ -0.7
POLR2J3-201ENST00000379340 TBC1D1Q86TI0 1168 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms