RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 LIPMQ5VYY2 423 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 PCED1BQ96HM7 432 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 APOL2Q9BQE5 337 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 CCDC28BQ9BUN5 200 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 KIFC1Q9BW19 673 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 ACE2Q9BYF1 805 aaPredicted RBP18.51■□□□□ 0.55
TDP2-202ENST00000378198 DRC3Q9H069 523 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 TKTL2Q9H0I9 626 aa18.51■□□□□ 0.55
TDP2-202ENST00000378198 MAGED2Q9UNF1 606 aaPredicted RBP18.51■□□□□ 0.55
TDP2-202ENST00000378198 MATN2O00339 956 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 CABYRO75952 493 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 F7P08709 466 aaPredicted RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 UBTFL6P0CB48 400 aaPredicted RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 THRAP10827 490 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 RPL14P50914 215 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 IRF5Q13568 498 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 RNF111Q6ZNA4 994 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 TLK2Q86UE8 772 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 KLHDC8BQ8IXV7 354 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 STON2Q8WXE9 905 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 DPF3Q92784 378 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 ZFP42Q96MM3 310 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 TSGA13Q96PP4 275 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 C1QTNF1Q9BXJ1 281 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 RHOJQ9H4E5 214 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 TASP1Q9H6P5 420 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 SPATS2LQ9NUQ6 558 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 CPSF2Q9P2I0 782 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 MYBPHLA2RUH7 354 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 HDAC3O15379 428 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 SORBS2O94875 1100 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 JCHAINP01591 159 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 SRGAP2BP0DMP2 458 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 COL6A2P12110 1019 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 PM20D1Q6GTS8 502 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 DCLRE1AQ6PJP8 1040 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 ZC3HC1Q86WB0 502 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 HPS6Q86YV9 775 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 ZSCAN18Q8TBC5 510 aaPredicted RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 BRI3BPQ8WY22 251 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 CCDC124Q96CT7 223 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 CNDP1Q96KN2 507 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 OR52B2Q96RD2 323 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 APBA2Q99767 749 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 KLHL4Q9C0H6 718 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 FAM192AQ9GZU8 254 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 CDH9Q9ULB4 789 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 PRPF19Q9UMS4 504 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 SSX2IPQ9Y2D8 614 aa18.5■□□□□ 0.55
TDP2-202ENST00000378198 AAR2Q9Y312 384 aaKnown RBP18.5■□□□□ 0.55
TDP2-202ENST00000378198 ENO4A6NNW6 628 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 HHLA1C9JL84 531 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 SLC22A2O15244 555 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 CACNG3O60359 315 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 LRIG2O94898 1065 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 IGFBP6P24592 240 aaPredicted RBP18.49■□□□□ 0.55
TDP2-202ENST00000378198 POLD2P49005 469 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 COL4A4P53420 1690 aaPredicted RBP18.49■□□□□ 0.55
TDP2-202ENST00000378198 SLC12A1Q13621 1099 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 PRAMEF19Q5SWL8 479 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 SEL1L3Q68CR1 1132 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 NAIF1Q69YI7 327 aaPredicted RBP18.49■□□□□ 0.55
TDP2-202ENST00000378198 TMEM151AQ8N4L1 468 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 ACVR1CQ8NER5 493 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 ZNF483Q8TF39 744 aaPredicted RBP18.49■□□□□ 0.55
TDP2-202ENST00000378198 IRGQQ8WZA9 623 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 SMARCD1Q96GM5 515 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 LENG8Q96PV6 779 aaPredicted RBP18.49■□□□□ 0.55
TDP2-202ENST00000378198 ADAMTS6Q9UKP5 1117 aa18.49■□□□□ 0.55
TDP2-202ENST00000378198 C17orf102A2RUQ5 167 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 RGSL1A5PLK6 1076 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 SLCO1B7G3V0H7 640 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 ZMPSTE24O75844 475 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 MPSTP25325 297 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 ADSLP30566 484 aaPredicted RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 GRIA4P48058 902 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 PRKAA1Q13131 559 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 PEX6Q13608 980 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 USP10Q14694 798 aaKnown RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 UGP2Q16851 508 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 FAM110CQ1W6H9 321 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 PCID2Q5JVF3 399 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 TCHHL1Q5QJ38 904 aaPredicted RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 C16orf89Q6UX73 402 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 ACAD11Q709F0 780 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 BHLHA9Q7RTU4 235 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 SETD3Q86TU7 594 aaPredicted RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 EDEM1Q92611 657 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 SERPINI1Q99574 410 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 EBF3Q9H4W6 596 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 UBP1Q9NZI7 540 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 VTI1BQ9UEU0 232 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 SNX10Q9Y5X0 201 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 CASQ2O14958 399 aaPredicted RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 DDHD2O94830 711 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 CHRNGP07510 517 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 PIK3R1P27986 724 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 RPL26P61254 145 aaKnown RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 MAP3K21Q5TCX8 1036 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 KBTBD6Q86V97 674 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms