RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FBXO36Q8NEA4 188 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 KBTBD8Q8NFY9 601 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SNX6Q9UNH7 406 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ERN1O75460 977 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CHKAP35790 457 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PDGFCQ9NRA1 345 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 UGT2A1Q9Y4X1 527 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PCDHB12Q9Y5F1 795 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CNTNAP2Q9UHC6 1331 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 NRP2O60462 931 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 GSTM2P28161 218 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SEMA5AQ13591 1074 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 MOGQ16653 247 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TEX44Q53QW1 395 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CSGALNACT1Q8TDX6 532 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 COX4I2Q96KJ9 171 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 RPA3P35244 121 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 GTF2A2P52657 109 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SNRNP48Q6IEG0 339 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 YME1L1Q96TA2 773 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SLC9A3R1O14745 358 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SERPINB7O75635 380 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 UBOX5O94941 541 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 DSG3P32926 999 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 AQP5P55064 265 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TPI1P60174 286 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ACOT12Q8WYK0 555 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 RPRD1AQ96P16 312 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 COLEC11Q9BWP8 271 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TRIM49D1C9J1S8 452 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FCHO1O14526 889 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 DDX42Q86XP3 938 aaKnown RBP eCLIP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 NSMCE2Q96MF7 247 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 OSBPL7Q9BZF2 842 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TXNP10599 105 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ACO1P21399 889 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 EEFSECP57772 596 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FBXW10Q5XX13 1052 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 GLB1LQ6UWU2 654 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 MGARPQ8TDB4 240 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 RUBCNLQ9H714 662 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 KLHL28Q9NXS3 571 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PEX16Q9Y5Y5 336 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TRIM49BA6NDI0 452 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TRIM38O00635 465 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SNX4O95219 450 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 AP3S2P59780 193 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 DPYSL2Q16555 572 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ZCCHC8Q6NZY4 707 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 MARK4Q96L34 752 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 QTRT2Q9H974 415 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 HSFX1Q9UBD0 423 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 GLS2Q9UI32 602 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 LEF1Q9UJU2 399 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SGPL1O95470 568 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 HPRP00739 348 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ZSCAN5DPP0CG00 497 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PACS2Q86VP3 889 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 RNF25Q96BH1 459 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PSKH2Q96QS6 385 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 WARS2Q9UGM6 360 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SNX7Q9UNH6 387 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 A6NHS1 94 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SLC22A3O75751 556 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 C14orf80Q86SX3 495 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CDK20Q8IZL9 346 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 UMODL1Q5DID0 1318 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FSTL1Q12841 308 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ASB13Q8WXK3 278 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 HBS1LQ9Y450 684 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 DNM1LO00429 736 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 RGS14O43566 566 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CCDC159P0C7I6 412 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SHQ1Q6PI26 577 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SNRNP27Q8WVK2 155 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FAM86B1E9PN63 330 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TLR2O60603 784 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FAM86B2P0C5J1 330 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 GNAZP19086 355 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ARID3BQ8IVW6 561 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SAMD4AQ9UPU9 718 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CSH1P0DML2 217 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CSH2P0DML3 217 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 IMPDH2P12268 514 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TDRD10Q5VZ19 366 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ITFG2Q969R8 447 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 LRRC3Q9BY71 257 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 RAD51BO15315 384 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ZBTB11O95625 1053 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ESR1P03372 595 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CLOCKO15516 846 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 AVILO75366 819 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 BAATQ14032 418 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TRIM40Q6P9F5 258 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PPP1R36Q96LQ0 422 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ACTR6Q9GZN1 396 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 MMP27Q9H306 513 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 LBPP18428 481 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms