RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
SEC23B-204ENST00000377475 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.76□□□□□ -0.53
SEC23B-204ENST00000377475 NOL11Q9H8H0 719 aaKnown RBP11.76□□□□□ -0.53
SEC23B-204ENST00000377475 YJEFN3A6XGL0 299 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 TSPAN1O60635 241 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 RTN3O95197 1032 aaPredicted RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 PTPN7P35236 360 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 CPOXP36551 454 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 BCAT1P54687 386 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 NSUN2Q08J23 767 aaKnown RBP eCLIP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 PPP1R3AQ16821 1122 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 SDHAF4Q5VUM1 108 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 ESRP1Q6NXG1 681 aaKnown RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 UTS2BQ765I0 119 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 ARCQ7LC44 396 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 LRTOMTQ8WZ04 291 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 TKTL2Q9H0I9 626 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 WDCPQ9H6R7 721 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 FBRSL1Q9HCM7 1045 aaKnown RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 NRP1O14786 923 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 SCAMP3O14828 347 aaKnown RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 MAGEB3O15480 346 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 MCF2P10911 925 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 CYP2C9P11712 490 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 PTPN1P18031 435 aaKnown RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 EPHX2P34913 555 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 RPL14P50914 215 aaKnown RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 IL1RL1Q01638 556 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 GRIK4Q16099 956 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 HBEGFQ99075 208 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 POMKQ9H5K3 350 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 ASB7Q9H672 318 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
SEC23B-204ENST00000377475 MPP6Q9NZW5 540 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 ZNF180Q9UJW8 692 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
SEC23B-204ENST00000377475 MEIS3P2A8K0S8 358 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 PDLIM1O00151 329 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ABLIM1O14639 778 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 AURKAO14965 403 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 MSI1O43347 362 aaKnown RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 CRTAMO95727 393 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 NR4A1P22736 598 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 FAM83EQ2M2I3 478 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 IL23RQ5VWK5 629 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 PARP8Q8N3A8 854 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 FSTL5Q8N475 847 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 SLC35F5Q8WV83 523 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 GALNT8Q9NY28 637 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 PGAP2Q9UHJ9 254 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ACOT9Q9Y305 439 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 NME7Q9Y5B8 376 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 UBA6A0AVT1 1052 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ARHGEF37A1IGU5 675 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 BIRC5O15392 142 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 SNNO75324 88 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 GCATO75600 419 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 USP2O75604 605 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 C22orf31O95567 290 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 PSMC3P17980 439 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 DYNC1I2Q13409 638 aaKnown RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 CAPRIN1Q14444 709 aaKnown RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 CHST15Q7LFX5 561 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ARNTL2Q8WYA1 636 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ESAMQ96AP7 390 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 TMIGD2Q96BF3 282 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 QKIQ96PU8 341 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 UTP6Q9NYH9 597 aaKnown RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ASB3Q9Y575 518 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 PTGDR2Q9Y5Y4 395 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 NR5A2O00482 541 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 AOC1P19801 751 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ME2P23368 584 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 GRIA3P42263 894 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 OAZ1P54368 228 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 BEX3Q00994 111 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ZBTB17Q13105 803 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 ITPRIPL1Q6GPH6 555 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 EGFL6Q8IUX8 553 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 OR52K2Q8NGK3 314 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 TRAPPC9Q96Q05 1148 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 NR1H4Q96RI1 486 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 SEPHS2Q99611 448 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 SOX17Q9H6I2 414 aaPredicted RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 EFCAB1Q9HAE3 211 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 SPON1Q9HCB6 807 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
SEC23B-204ENST00000377475 OR12D3Q9UGF7 316 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 FETUBQ9UGM5 382 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 SFMBT1Q9UHJ3 866 aa11.74□□□□□ -0.53
SEC23B-204ENST00000377475 OR51F1A6NGY5 319 aa11.73□□□□□ -0.53
SEC23B-204ENST00000377475 HDAC3O15379 428 aa11.73□□□□□ -0.53
SEC23B-204ENST00000377475 MYL3P08590 195 aa11.73□□□□□ -0.53
SEC23B-204ENST00000377475 TGFB3P10600 412 aa11.73□□□□□ -0.53
SEC23B-204ENST00000377475 YWHAQP27348 245 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms