RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 XPR1Q9UBH6 696 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 TSR3Q9UJK0 312 aaKnown RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 BRCA2P51587 3418 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 PTGESO14684 152 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 PGK1P00558 417 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 MLNP12872 115 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 LIMK2P53671 638 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 ACAD11Q709F0 780 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 PCDH20Q8N6Y1 951 aaKnown RBP13.15□□□□□ -0.3
USP11-204ENST00000377107 SMG8Q8ND04 991 aaKnown RBP13.15□□□□□ -0.3
USP11-204ENST00000377107 PHC3Q8NDX5 983 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 ACMSDQ8TDX5 336 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 NXNL1Q96CM4 212 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 RCN3Q96D15 328 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 TRIM4Q9C037 500 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 MIOSQ9NXC5 875 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 ST3GAL5Q9UNP4 418 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 MAGEA13PA6NCF6 341 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 ATP6V1B1P15313 513 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 CD68P34810 354 aaPredicted RBP13.15□□□□□ -0.3
USP11-204ENST00000377107 MED21Q13503 144 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
USP11-204ENST00000377107 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 TMEM209Q96SK2 561 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 CDH19Q9H159 772 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 IL1RL2Q9HB29 575 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 S100A14Q9HCY8 104 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 NOD1Q9Y239 953 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 POMPQ9Y244 141 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 COL1A2P08123 1366 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 LCTP09848 1927 aa13.15□□□□□ -0.3
USP11-204ENST00000377107 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 GPC4O75487 556 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 PGM3O95394 542 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 STAU1O95793 577 aaKnown RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 GSRP00390 522 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 MAGEA6P43360 314 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 GLUD2P49448 558 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 CCNG1P51959 295 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 AQP4P55087 323 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 CDH17Q12864 832 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 C3orf58Q8NDZ4 430 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 MAF1Q9H063 256 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 ABI2Q9NYB9 513 aaPredicted RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 DERAQ9Y315 318 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 F8W810 466 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 FYNP06241 537 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 ITGAXP20702 1163 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 RAP1GDS1P52306 607 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 FLOT2Q14254 428 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 FBXO48Q5FWF7 155 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 SH2D4BQ5SQS7 431 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 NAPEPLDQ6IQ20 393 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 APBB2Q92870 758 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 LRGUKQ96M69 825 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 NPAS2Q99743 824 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 SUDS3Q9H7L9 328 aaPredicted RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 COPS7BQ9H9Q2 264 aaPredicted RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 ACOT9Q9Y305 439 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 TIMM44O43615 452 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 JUNP05412 331 aaKnown RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 PIRTP0C851 137 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 GPR162Q16538 588 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 SFT2D3Q587I9 215 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 SLC30A9Q6PML9 568 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 PAF1Q8N7H5 531 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 KLHL5Q96PQ7 755 aa13.14□□□□□ -0.31
USP11-204ENST00000377107 RPL26L1Q9UNX3 145 aaKnown RBP13.14□□□□□ -0.31
USP11-204ENST00000377107 SMIM35A0A1B0GVV1 85 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 DCLK1O15075 740 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 LYNP07948 512 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 TFEBP19484 476 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 BTKQ06187 659 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 IYDQ6PHW0 289 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 METTL23Q86XA0 190 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 MIB1Q86YT6 1006 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 FSTL5Q8N475 847 aaPredicted RBP13.13□□□□□ -0.31
USP11-204ENST00000377107 ZDHHC2Q9UIJ5 367 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 FBXW11Q9UKB1 542 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 ADAMTS6Q9UKP5 1117 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 C9JVG2 144 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 AHSGP02765 367 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 PIK3R1P27986 724 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 DPYSQ14117 519 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 TBCCQ15814 346 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 ICA1LQ8NDH6 482 aa13.13□□□□□ -0.31
USP11-204ENST00000377107 OR6Y1Q8NGX8 325 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms