RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TMEM59LQ9UK28 342 aa21.55■■□□□ 1.04
VSX1-201ENST00000376707 A0A0D9SEW6 157 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 K7ERQ8 282 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 KPNA3O00505 521 aaPredicted RBP21.54■■□□□ 1.04
VSX1-201ENST00000376707 MAGEC1O60732 1142 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 TPM2P07951 284 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 RRM1P23921 792 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 EPHA8P29322 1005 aaPredicted RBP21.54■■□□□ 1.04
VSX1-201ENST00000376707 CHRNA3P32297 505 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 CLCN6P51797 869 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 CCDC15Q0P6D6 951 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 STAT4Q14765 748 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 SETMARQ53H47 684 aaPredicted RBP21.54■■□□□ 1.04
VSX1-201ENST00000376707 LINGO4Q6UY18 593 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 IQCHQ86VS3 1027 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 FAM131BQ86XD5 332 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 ZNF677Q86XU0 584 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 OXR1Q8N573 874 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 OR2A12Q8NGT7 310 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 HAPLN3Q96S86 360 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 PREBQ9HCU5 417 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 DYRK4Q9NR20 520 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 DAAM1Q9Y4D1 1078 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 WDFY3Q8IZQ1 3526 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 SPEGQ15772 3267 aa21.54■■□□□ 1.04
VSX1-201ENST00000376707 IGLV3-10A0A075B6K4 115 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 SMAD6O43541 496 aaKnown RBP21.53■■□□□ 1.04
VSX1-201ENST00000376707 GFPT2O94808 682 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 LDOC1O95751 146 aaPredicted RBP21.53■■□□□ 1.04
VSX1-201ENST00000376707 CTSLP07711 333 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 RECQLP46063 649 aaPredicted RBP21.53■■□□□ 1.04
VSX1-201ENST00000376707 OVGP1Q12889 678 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 STX1AQ16623 288 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 TRNP1Q6NT89 227 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 SASS6Q6UVJ0 657 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 DHRS13Q6UX07 377 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 ARCQ7LC44 396 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 OR7D4Q8NG98 312 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 MDM1Q8TC05 714 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 SLC20A1Q8WUM9 679 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 CNDP2Q96KP4 475 aaKnown RBP21.53■■□□□ 1.04
VSX1-201ENST00000376707 SPON2Q9BUD6 331 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 ZYG11BQ9C0D3 744 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 ERVMER34-1Q9H9K5 563 aa21.53■■□□□ 1.04
VSX1-201ENST00000376707 METTL5Q9NRN9 209 aaKnown RBP21.53■■□□□ 1.04
VSX1-201ENST00000376707 NOCTQ9UK39 431 aaKnown RBP21.53■■□□□ 1.04
VSX1-201ENST00000376707 CABIN1Q9Y6J0 2220 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 ZZEF1O43149 2961 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 ILVBLA1L0T0 632 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 PRAMEF26H0Y7S4 382 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 CBX4O00257 560 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 ENC1O14682 589 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 RNGTTO60942 597 aaKnown RBP21.52■■□□□ 1.04
VSX1-201ENST00000376707 MBD3O95983 291 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 PRNPP04156 253 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 KLK7P49862 253 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 JAM2P57087 298 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 ATP11AP98196 1134 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 FKBP15Q5T1M5 1219 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 PIP5KL1Q5T9C9 394 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 C22orf39Q6P5X5 142 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 BNIPLQ7Z465 357 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 SPATS2Q86XZ4 545 aaKnown RBP21.52■■□□□ 1.04
VSX1-201ENST00000376707 MARCH9Q86YJ5 346 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 EID2Q8N6I1 236 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 EMC1Q8N766 993 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 TMIEQ8NEW7 156 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 TNKS2Q9H2K2 1166 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 FAM207AQ9NSI2 230 aaPredicted RBP21.52■■□□□ 1.04
VSX1-201ENST00000376707 SIK3Q9Y2K2 1263 aa21.52■■□□□ 1.04
VSX1-201ENST00000376707 FAM149AA5PLN7 773 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 GLDCP23378 1020 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 RXRGP48443 463 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 TAS2R38P59533 333 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 POLR2FP61218 127 aaKnown RBP21.51■■□□□ 1.03
VSX1-201ENST00000376707 CDR2Q01850 454 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 MYL5Q02045 173 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 SMAD1Q15797 465 aaKnown RBP21.51■■□□□ 1.03
VSX1-201ENST00000376707 RETSATQ6NUM9 610 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 ZNF783Q6ZMS7 281 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 CHST14Q8NCH0 376 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 GRIN3AQ8TCU5 1115 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 ATP13A1Q9HD20 1204 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 NLRC4Q9NPP4 1024 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 LIMA1Q9UHB6 759 aaKnown RBP21.51■■□□□ 1.03
VSX1-201ENST00000376707 LHX6Q9UPM6 363 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 PCDHGA1Q9Y5H4 931 aa21.51■■□□□ 1.03
VSX1-201ENST00000376707 A0A1W2PQU0 124 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 LRRC10BA6NIK2 292 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 EPHB6O15197 1021 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 ENDOD1O94919 500 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 CYP1A1P04798 512 aaPredicted RBP21.5■■□□□ 1.03
VSX1-201ENST00000376707 SOX5P35711 763 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 COPB1P53618 953 aaKnown RBP21.5■■□□□ 1.03
VSX1-201ENST00000376707 BNIP3Q12983 259 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 CDO1Q16878 200 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 ARL13BQ3SXY8 428 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 CCDC183Q5T5S1 534 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 NEK5Q6P3R8 708 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 DRC7Q8IY82 874 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms