RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SERPINI1Q99574 410 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 RBM38Q9H0Z9 239 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 Q9H521 79 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 TMCO1Q9UM00 188 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PRPF19Q9UMS4 504 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PDLIM1O00151 329 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 MAGEA12P43365 314 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 GLRBP48167 497 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 LIMK2P53671 638 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 IFRD2Q12894 506 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 NAB1Q13506 487 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 EML3Q32P44 896 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 C16orf89Q6UX73 402 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 TICAM1Q8IUC6 712 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 OR6B3Q8NGW1 331 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 APOL2Q9BQE5 337 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 SENP6Q9GZR1 1112 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 ZDHHC2Q9UIJ5 367 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 RAB26Q9ULW5 256 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 H3BSA7 217 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 GRID2O43424 1007 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 PIGNO95427 931 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 GRIA4P48058 902 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 TNFAIP2Q03169 654 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 PPP2R5DQ14738 602 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 ARL13AQ5H913 290 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 CERCAMQ5T4B2 595 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 PLPPR4Q7Z2D5 763 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 AMIGO2Q86SJ2 522 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 LCA5Q86VQ0 697 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 NAT9Q9BTE0 207 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 EIF2B3Q9NR50 452 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-202ENST00000375692 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 HACD1B0YJ81 288 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 CA12O43570 354 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF286BP0CG31 522 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TPH1P17752 444 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 NELFEP18615 380 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TFEBP19484 476 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 DEFB115Q30KQ5 88 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 CLEC14AQ86T13 490 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 DNAAF3Q8N9W5 541 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF784Q8NCA9 323 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 CAPNS2Q96L46 248 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 NPAS2Q99743 824 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 MRPL1Q9BYD6 325 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 MRPS26Q9BYN8 205 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 WDR41Q9HAD4 459 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 OXSMQ9NWU1 459 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 BPTFQ12830 3046 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 ZCWPW2A0A1B0GU75 182 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TMEM114B3SHH9 223 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 HDAC3O15379 428 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TNFAIP8O95379 198 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 FAM200BP0CF97 657 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 RPL14P50914 215 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 NAGLUP54802 743 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 NRF1Q16656 503 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 SMYD5Q6GMV2 418 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 FAM43BQ6ZT52 329 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 SLC26A9Q7LBE3 791 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 AHI1Q8N157 1196 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 RP9Q8TA86 221 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 ACE2Q9BYF1 805 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 UNKQ9C0B0 810 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 SEMA6AQ9H2E6 1030 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 ABHD16BQ9H3Z7 469 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 TASP1Q9H6P5 420 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 SLC39A10Q9ULF5 831 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 FZD10Q9ULW2 581 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 AKT3Q9Y243 479 aa14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF638Q14966 1978 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-202ENST00000375692 PHGDHO43175 533 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 TMCC1O94876 653 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 C22orf31O95567 290 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 SBK3P0C264 359 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 FAM58BPP0C7Q3 252 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 AVPR1AP37288 418 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 MYBPC3Q14896 1274 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 EXOC8Q8IYI6 725 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 DEFB106AQ8N104 65 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ADCY4Q8NFM4 1077 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ISL2Q96A47 359 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 CNDP1Q96KN2 507 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF696Q9H7X3 374 aa14.35□□□□□ -0.11
CLCNKA-202ENST00000375692 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms