RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MPZL3Q6UWV2 235 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 IFNLR1Q8IU57 520 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 FIBCD1Q8N539 461 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 COG8Q96MW5 612 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 CEP44Q9C0F1 390 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 APOBEC3GQ9HC16 384 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 KLHL11Q9NVR0 708 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
C9orf3-203ENST00000375315 PTBP2Q9UKA9 531 aaKnown RBP12.37□□□□□ -0.43
C9orf3-203ENST00000375315 LAMA3Q16787 3333 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 ANKRD34BA5PLL1 514 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 LACTBL1A8MY62 500 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 TNFRSF10AO00220 468 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 KRT75O95678 551 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 HSPA8P11142 646 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF26P17031 533 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 TM4SF4P48230 202 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 VEGFBP49765 207 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 MRPS5P82675 430 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 MTM1Q13496 603 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 AMHR2Q16671 573 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 BNC2Q6ZN30 1099 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 PPM1NQ8N819 430 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 BHLHE22Q8NFJ8 381 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 PDCD6IPQ8WUM4 868 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 SOCS4Q8WXH5 440 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 DDX1Q92499 740 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 SLITRK1Q96PX8 696 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 C1orf50Q9BV19 199 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 C2orf40Q9H1Z8 148 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 XPNPEP3Q9NQH7 507 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 PACSIN3Q9UKS6 424 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 ZSWIM8A7E2V4 1837 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 APOEP02649 317 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 CD19P15391 556 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 TCEA1P23193 301 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 CPT1AP50416 773 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 C16orf46Q6P387 395 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 VASH1Q7L8A9 365 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 SLC15A4Q8N697 577 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 PSD2Q9BQI7 771 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
C9orf3-203ENST00000375315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 TMA7Q9Y2S6 64 aaKnown RBP12.36□□□□□ -0.43
C9orf3-203ENST00000375315 C7orf72A4D263 438 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 PIK3R2O00459 728 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 SNAP91O60641 907 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ITGB3P05106 788 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 EPHA3P29320 983 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 RCVRNP35243 200 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ELK3P41970 407 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 IDH3AP50213 366 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 AARS2Q5JTZ9 985 aaKnown RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 GPR107Q5VW38 600 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 JADE1Q6IE81 842 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 MFSD7Q6UXD7 560 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF354CQ86Y25 554 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM102Q8N9M5 508 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 DOK1Q99704 481 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 FZD8Q9H461 694 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 SPC25Q9HBM1 224 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 VPS51Q9UID3 782 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 KIAA0100Q14667 2235 aaKnown RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 KBTBD13C9JR72 458 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 DCXO43602 365 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ALOX5P09917 674 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 UNGP13051 313 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 XRCC1P18887 633 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 NUDT2P50583 147 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 CTBSQ01459 385 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 OTUD4Q01804 1114 aaKnown RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 FGD3Q5JSP0 725 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ANKRD26P1Q6NSI1 321 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 CPNE9Q8IYJ1 553 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 TNIP2Q8NFZ5 429 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 CALML6Q8TD86 181 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 ERLEC1Q96DZ1 483 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 NXF3Q9H4D5 531 aaKnown RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 PRMT7Q9NVM4 692 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-203ENST00000375315 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 NOTOA8MTQ0 251 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
C9orf3-203ENST00000375315 AIM2O14862 343 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms