RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 SYCE1Q8N0S2 351 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 NPWQ8N729 165 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 MRGPRX1Q96LB2 322 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 TPSD1Q9BZJ3 242 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 SLC39A8Q9C0K1 460 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 MKRN2Q9H000 416 aaKnown RBP12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 PRDM16Q9HAZ2 1276 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 ETNK2Q9NVF9 386 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 TRIM10Q9UDY6 481 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 RAPGEFL1Q9UHV5 662 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 R4GN57 208 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 WDFY4Q6ZS81 3184 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
HLA-DQA2-210ENST00000374940 GRID2IPA4D2P6 1211 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 K7ERQ8 282 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 RNASEH1O60930 286 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 C7P10643 843 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 BYSLQ13895 437 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 ELAVL3Q14576 367 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 USP39Q53GS9 565 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 INO80DQ53TQ3 878 aaPredicted RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 ZNF662Q6ZS27 426 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 METTL3Q86U44 580 aaKnown RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 PRCCQ92733 491 aaPredicted RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 SIPA1Q96FS4 1042 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 CCDC114Q96M63 670 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 CEP44Q9C0F1 390 aa12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.4
HLA-DQA2-210ENST00000374940 C3orf70A6NLC5 250 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 DFFAO00273 331 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ZNF217O75362 1048 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PALMO75781 387 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 CD160O95971 181 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 CTNNA1P35221 906 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 NBL1P41271 181 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PAFAH1B3Q15102 231 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ZNF776Q68DI1 518 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 C22orf39Q6P5X5 142 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 KIAA1324Q6UXG2 1013 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 Q6ZVU0 165 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 DSG4Q86SJ6 1040 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 GAB3Q8WWW8 586 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ISG20Q96AZ6 181 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RNF157Q96PX1 679 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 MAK16Q9BXY0 300 aaKnown RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 SLC6A17Q9H1V8 727 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 AMFRQ9UKV5 643 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 GUCA1BQ9UMX6 200 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 MFHAS1Q9Y4C4 1052 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
HLA-DQA2-210ENST00000374940 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 MCF2LO15068 1137 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 HRO43593 1189 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RPP40O75818 363 aaKnown RBP12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ZRANB2O95218 330 aaKnown RBP eCLIP12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ACADMP11310 421 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 VAV1P15498 845 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 CTNNA2P26232 953 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RECQLP46063 649 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RPS14P62263 151 aaKnown RBP12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 NHLH1Q02575 133 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 IL10RBQ08334 325 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 NCBP2-AS2Q69YL0 99 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 MFSD7Q6UXD7 560 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 LEKR1Q6ZMV7 388 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 NT5DC3Q86UY8 548 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 C11orf74Q86VG3 221 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RCOR2Q8IZ40 523 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 STK40Q8N2I9 435 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PQLC3Q8N755 202 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 OR2A12Q8NGT7 310 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 OR8D1Q8WZ84 308 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 SPACA7Q96KW9 195 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 FAM129BQ96TA1 746 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 SP110Q9HB58 689 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 PDFQ9HBH1 243 aa12.51□□□□□ -0.41
HLA-DQA2-210ENST00000374940 ITM2CQ9NQX7 267 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms