RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MRPL39Q9NYK5 338 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 AHSPQ9NZD4 102 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 DUSP12Q9UNI6 340 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 GIT1Q9Y2X7 761 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 SOWAHBA6NEL2 793 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FAM170BA6NMN3 283 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MPOP05164 745 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 EPHX1P07099 455 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 TAL1P17542 331 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ALDH6A1Q02252 535 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 PLEKHG6Q3KR16 790 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 LDLRAD1Q5T700 205 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 OR14C36Q8NHC7 312 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ZSCAN18Q8TBC5 510 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FEZF2Q8TBJ5 459 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 TFB1MQ8WVM0 346 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 AUTS2Q8WXX7 1259 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FAM120BQ96EK7 910 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MCEEQ96PE7 176 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 HAPLN3Q96S86 360 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 C17orf75Q9HAS0 396 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.39□□□□□ -1.391e-7■■■□□ 14.9
PTPN3-202ENST00000374541 SH3BP4Q9P0V3 963 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 SORCS3Q9UPU3 1222 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 LOC100653049A0A140TA62 436 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 SMIM35A0A1B0GVV1 85 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MAGEB16A2A368 324 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 NEDD8-MDP1E9PL57 170 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 TSC22D2O75157 780 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 RNASEH2AO75792 299 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KRT34O76011 436 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MTA2O94776 668 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 CHRM3P20309 590 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 COMTP21964 271 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 TARSP26639 723 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 XRCC4Q13426 336 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 NCOA4Q13772 614 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KCNT1Q5JUK3 1230 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 SHC4Q6S5L8 630 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KLHL24Q6TFL4 600 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 DDX1Q92499 740 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FAM163AQ96GL9 167 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 TMEM237Q96Q45 408 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 GPR63Q9BZJ6 419 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 TSR3Q9UJK0 312 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 DYRK1BQ9Y463 629 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 NFAT5O94916 1531 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 SDR42E2A6NKP2 422 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 CXCL12P48061 93 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 RGS7P49802 495 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 STX4Q12846 297 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 GSTA3Q16772 222 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 HECTD3Q5T447 861 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FUT10Q6P4F1 479 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 DOK6Q6PKX4 331 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ARHGEF19Q8IW93 802 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 C10orf53Q8N6V4 93 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 FNIP1Q8TF40 1166 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 WDR60Q8WVS4 1066 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KCTD14Q9BQ13 255 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KIFC1Q9BW19 673 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 L2HGDHQ9H9P8 463 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 RNF112Q9ULX5 631 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MYL12BO14950 172 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 CST8O60676 142 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ATP9AO75110 1047 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KLHL18O94889 574 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ALOX5P09917 674 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MYL12AP19105 171 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 PSMB9P28065 219 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MZF1P28698 734 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 GRK3P35626 688 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 BMPR1AP36894 532 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 PIK3CGP48736 1102 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 NUMBP49757 651 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ACOX1Q15067 660 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 KIAA0408Q6ZU52 694 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 METTL16Q86W50 562 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 AADATQ8N5Z0 425 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 PPP1R14AQ96A00 147 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 CENPTQ96BT3 561 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 SAR1AQ9NR31 198 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 ARHGEF4Q9NR80 690 aa6.39□□□□□ -1.39
PTPN3-202ENST00000374541 RPL26L1Q9UNX3 145 aaKnown RBP6.39□□□□□ -1.39
PTPN3-202ENST00000374541 A0A0A6YYK5 440 aaPredicted RBP6.38□□□□□ -1.39
PTPN3-202ENST00000374541 NEMP2A6NFY4 417 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 MFN2O95140 757 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ATP6V1G2O95670 118 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 LDLRP01130 860 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ITGALP20701 1170 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ATP6V1B2P21281 511 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 NAMPTP43490 491 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 CSE1LP55060 971 aaKnown RBP6.38□□□□□ -1.39
PTPN3-202ENST00000374541 SLC29A2Q14542 456 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC153Q494R4 210 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 TBCELQ5QJ74 424 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF57Q68EA5 555 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms