RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 COMTP21964 271 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 SOX11P35716 441 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 FXR1P51114 621 aaKnown RBP eCLIP7.13□□□□□ -1.27
CSMD2-206ENST00000373388 ST3GAL1Q11201 340 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF234Q14588 700 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 PACRGLQ8N7B6 248 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 PCDHB16Q9NRJ7 776 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 DMGDHQ9UI17 866 aaKnown RBP7.13□□□□□ -1.27
CSMD2-206ENST00000373388 TRAF6Q9Y4K3 522 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 SH3PXD2BA1X283 911 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 CPNE3O75131 537 aaKnown RBP7.13□□□□□ -1.27
CSMD2-206ENST00000373388 EIF4A1P60842 406 aaKnown RBP7.13□□□□□ -1.27
CSMD2-206ENST00000373388 PROSER3Q2NL68 480 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 BOLA3Q53S33 107 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 BPIFB6Q8NFQ5 453 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF560Q96MR9 790 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 CLCC1Q96S66 551 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 CELF4Q9BZC1 486 aaKnown RBP7.13□□□□□ -1.27
CSMD2-206ENST00000373388 PUS3Q9BZE2 481 aaKnown RBP7.13□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF350Q9GZX5 532 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 LIMD1Q9UGP4 676 aa7.13□□□□□ -1.27
CSMD2-206ENST00000373388 TULP3O75386 442 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PRH1P02810 166 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 IDH2P48735 452 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 FMO5P49326 533 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CDH11P55287 796 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PDK2Q15119 407 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PSMD5Q16401 504 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MFSD5Q6N075 450 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 AMIGO2Q86SJ2 522 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 FBXO36Q8NEA4 188 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TERB2Q8NHR7 220 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PPA2Q9H2U2 334 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CDH7Q9ULB5 785 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SPTBN1Q01082 2364 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 OR6B1O95007 311 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PHKA2P46019 1235 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PDIA5Q14554 519 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 DNAJA4Q8WW22 397 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ART5Q96L15 291 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 BIN3Q9NQY0 253 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 M0QYV0 167 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TRIM38O00635 465 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SCGNO76038 276 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 UMPSP11172 480 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PRDX6P30041 224 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 HPCAL1P37235 193 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF613Q6PF04 617 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TMPRSS11AQ6ZMR5 421 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 LURAP1Q96LR2 239 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TRNT1Q96Q11 434 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RETREG1Q9H6L5 497 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MAGEL2Q9UJ55 1249 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CASZ1Q86V15 1759 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MVKQ03426 396 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TNFAIP1Q13829 316 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ANKDD1AQ495B1 522 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RNF219Q5W0B1 726 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RAB11FIP2Q7L804 512 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 DHX35Q9H5Z1 703 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 F5H423 210 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TSHRP16473 764 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF24P17028 368 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PVALBP20472 110 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SLC6A4P31645 630 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MATKP42679 507 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 YWHAZP63104 245 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MTERF2Q49AM1 385 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 OR52K2Q8NGK3 314 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ZSCAN18Q8TBC5 510 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 DDX50Q9BQ39 737 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 GGA3Q9NZ52 723 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 FLT1P17948 1338 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PNMA6FA0A0J9YX94 578 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MSH4O15457 936 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 AIREO43918 545 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 PCDHGA12O60330 932 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 DNAJB2P25686 324 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 HOXD12P35452 270 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ASIC4Q96FT7 647 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ADI1Q9BV57 179 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 EIF3KQ9UBQ5 218 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CCNT2O60583 730 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 RPL4P36578 427 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 TAGLNQ01995 201 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MGAT5Q09328 741 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CHSY1Q86X52 802 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SULF1Q8IWU6 871 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SVOPLQ8N434 492 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 FBXO25Q8TCJ0 367 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SPIRE2Q8WWL2 714 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ZNF669Q96BR6 464 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MED30Q96HR3 178 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CST11Q9H112 138 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 SLC35C2Q9NQQ7 365 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 MFHAS1Q9Y4C4 1052 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 ALG6Q9Y672 507 aa7.12□□□□□ -1.27
CSMD2-206ENST00000373388 EIF4G3O43432 1585 aaKnown RBP7.12□□□□□ -1.27
CSMD2-206ENST00000373388 CRABP2P29373 138 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms